Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1756X
         (367 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032496-1|ABK29703.1|  965|Drosophila melanogaster middleman of...    27   7.5  
AE014134-2016|AAF53057.2|  968|Drosophila melanogaster CG31868-P...    27   7.5  
AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.    27   10.0 
AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA...    27   10.0 

>EF032496-1|ABK29703.1|  965|Drosophila melanogaster middleman of
           seventy-eight signalingprotein.
          Length = 965

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 174 LITRDHLVITEATKSGPRRMLNTIIPNELVXP 269
           L+T DHLV +   K GP   L +I+  +L  P
Sbjct: 829 LLTEDHLVNSLGMKLGPALKLRSILAKKLGGP 860


>AE014134-2016|AAF53057.2|  968|Drosophila melanogaster CG31868-PA
           protein.
          Length = 968

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 174 LITRDHLVITEATKSGPRRMLNTIIPNELVXP 269
           L+T DHLV +   K GP   L +I+  +L  P
Sbjct: 832 LLTEDHLVNSLGMKLGPALKLRSILAKKLGGP 863


>AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 160 TVFY*HILVFIAFCHVTIIFC*SGTTTPAACRALFI 53
           +VF+ H +    +C VTI FC       A  RA+ I
Sbjct: 6   SVFFHHTVTRRTWCAVTIFFCRQRNVNSAMIRAISI 41


>AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA,
           isoform A protein.
          Length = 696

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 160 TVFY*HILVFIAFCHVTIIFC*SGTTTPAACRALFI 53
           +VF+ H +    +C VTI FC       A  RA+ I
Sbjct: 6   SVFFHHTVTRRTWCAVTIFFCRQRNVNSAMIRAISI 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,402
Number of Sequences: 53049
Number of extensions: 265914
Number of successful extensions: 433
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)