Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1756X
(367 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 4.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 8.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 8.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 8.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 8.0
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.0 bits (42), Expect = 4.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 366 IRTIVSKFLTYLPKTICSIIP 304
IR+I L KT+C +IP
Sbjct: 212 IRSIQGTGTIILKKTVCFVIP 232
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/38 (23%), Positives = 15/38 (39%)
Frame = +2
Query: 35 ESNQYSNEEXXXXXXXXXXXXXKDYSDMTKCNEDQDMS 148
E N Y NE +D ++ +C E + +S
Sbjct: 46 EQNSYKNEREYQKYRETSKERSRDRTERERCKEPKIIS 83
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 83 SNNNSLSNNYNYNNNYNN 100
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 316 SNNNSLSNNYNYNNNYNN 333
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 2 SYDNSMIRSYGESNQYSN 55
S +NS+ +Y +N Y+N
Sbjct: 316 SNNNSLSNNYNYNNNYNN 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,668
Number of Sequences: 438
Number of extensions: 1938
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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