Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1751
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease r... 138 6e-33
AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p pro... 138 6e-33
AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA... 138 6e-33
BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro... 31 2.5
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase... 31 2.5
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA... 31 2.5
AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p pro... 30 3.3
AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-P... 30 3.3
AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC... 29 7.6
AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB... 29 7.6
AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA... 29 7.6
>S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease
regulatory complexnon-ATPase subunit protein.
Length = 396
Score = 138 bits (335), Expect = 6e-33
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +3
Query: 258 GRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTDEKELVKLA 437
GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +E +LVK A
Sbjct: 69 GRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQA 128
Query: 438 KRLKKEKVNCDVVSFGEDSENNPL 509
KRLKKEKVN D+VSFG+ NN +
Sbjct: 129 KRLKKEKVNVDIVSFGDHGNNNEI 152
Score = 102 bits (244), Expect = 7e-22
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 234
MVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMISFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 235 LATLTSE 255
LATLTS+
Sbjct: 61 LATLTSD 67
Score = 72.9 bits (171), Expect = 5e-13
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 LTTFVNTLNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXX-FEFG 685
LT F+N LNGKD + GSHLVSVP G VLS+AL++S FEFG
Sbjct: 153 LTAFINALNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFG 208
Query: 686 VDPNVDPELALALRVSM 736
VDPN DPELALALRVSM
Sbjct: 209 VDPNEDPELALALRVSM 225
>AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p
protein.
Length = 433
Score = 138 bits (335), Expect = 6e-33
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +3
Query: 258 GRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTDEKELVKLA 437
GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +E +LVK A
Sbjct: 106 GRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQA 165
Query: 438 KRLKKEKVNCDVVSFGEDSENNPL 509
KRLKKEKVN D+VSFG+ NN +
Sbjct: 166 KRLKKEKVNVDIVSFGDHGNNNEI 189
Score = 114 bits (275), Expect = 1e-25
Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 KNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN 225
KNTKMVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N
Sbjct: 34 KNTKMVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSN 93
Query: 226 -VEVLATLTSE 255
VEVLATLTS+
Sbjct: 94 TVEVLATLTSD 104
Score = 72.9 bits (171), Expect = 5e-13
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 LTTFVNTLNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXX-FEFG 685
LT F+N LNGKD + GSHLVSVP G VLS+AL++S FEFG
Sbjct: 190 LTAFINALNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFG 245
Query: 686 VDPNVDPELALALRVSM 736
VDPN DPELALALRVSM
Sbjct: 246 VDPNEDPELALALRVSM 262
>AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA
protein.
Length = 396
Score = 138 bits (335), Expect = 6e-33
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +3
Query: 258 GRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTDEKELVKLA 437
GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +E +LVK A
Sbjct: 69 GRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQA 128
Query: 438 KRLKKEKVNCDVVSFGEDSENNPL 509
KRLKKEKVN D+VSFG+ NN +
Sbjct: 129 KRLKKEKVNVDIVSFGDHGNNNEI 152
Score = 106 bits (254), Expect = 4e-23
Identities = 50/67 (74%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 234
MVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 235 LATLTSE 255
LATLTS+
Sbjct: 61 LATLTSD 67
Score = 72.9 bits (171), Expect = 5e-13
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 LTTFVNTLNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXX-FEFG 685
LT F+N LNGKD + GSHLVSVP G VLS+AL++S FEFG
Sbjct: 153 LTAFINALNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFG 208
Query: 686 VDPNVDPELALALRVSM 736
VDPN DPELALALRVSM
Sbjct: 209 VDPNEDPELALALRVSM 225
>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
protein.
Length = 1221
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSE 255
CV Y TRL Q QD + + +K N NN +LTL +E +AT SE
Sbjct: 134 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 192
>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
protein.
Length = 1924
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSE 255
CV Y TRL Q QD + + +K N NN +LTL +E +AT SE
Sbjct: 836 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 894
>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
protein.
Length = 1929
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSE 255
CV Y TRL Q QD + + +K N NN +LTL +E +AT SE
Sbjct: 842 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 900
>AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVVFVGSPVNTDEKELVKLA 437
+ + L V + +L G+ +A +LK +H R IV+ +GS D ++
Sbjct: 132 KALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVIIMGSLTTCDPVDINLTI 189
Query: 438 KRLKKEKVNCDVVSFGED 491
LKKE + C V+S +
Sbjct: 190 DELKKEGIRCSVISLSAE 207
>AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-PA
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVVFVGSPVNTDEKELVKLA 437
+ + L V + +L G+ +A +LK +H R IV+ +GS D ++
Sbjct: 132 KALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVIIMGSLTTCDPVDINLTI 189
Query: 438 KRLKKEKVNCDVVSFGED 491
LKKE + C V+S +
Sbjct: 190 DELKKEGIRCSVISLSAE 207
>AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC,
isoform C protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 291 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 386
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB,
isoform B protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 291 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 386
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA,
isoform A protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 291 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 386
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,355,983
Number of Sequences: 53049
Number of extensions: 734346
Number of successful extensions: 1826
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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