Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1750
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ225682-1|CAA12563.1|   75|Homo sapiens Ig heavy chain variable...    31   5.6  
DQ100673-1|AAZ08680.1|  130|Homo sapiens immunoglobulin heavy ch...    30   7.3  
DQ524019-1|ABI35531.1|  118|Homo sapiens immunoglobulin heavy ch...    30   9.7  
BC018706-1|AAH18706.1|  480|Homo sapiens TNS4 protein protein.         30   9.7  
AM233768-1|CAJ84041.1|  123|Homo sapiens immunoglobulin heavy ch...    30   9.7  
AK027856-1|BAB55413.1|  480|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AF417488-1|AAN32666.1|  715|Homo sapiens C-terminal tensin-like ...    30   9.7  

>AJ225682-1|CAA12563.1|   75|Homo sapiens Ig heavy chain variable
           region protein.
          Length = 75

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 182 RGPPGPACDWAGARIFRGS--YSKSI*SHVYIS 90
           R PPG   +W G+  +RGS  YS S+ S + IS
Sbjct: 2   RQPPGKGLEWIGSIYYRGSAFYSPSLKSRITIS 34


>DQ100673-1|AAZ08680.1|  130|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 130

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 182 RGPPGPACDWAGARIFRGS--YSKSI*SHVYIS 90
           R PPG   +W G+  +RGS  Y+ S+ S V IS
Sbjct: 40  RQPPGKGLEWIGSIYYRGSTYYNSSLKSRVTIS 72


>DQ524019-1|ABI35531.1|  118|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 118

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 182 RGPPGPACDWAGARIFRG--SYSKSI*SHVYIS 90
           R PPG   +W G   +RG  +YS+S+ S V IS
Sbjct: 37  RQPPGKGLEWIGYIYYRGNTNYSRSLKSRVTIS 69


>BC018706-1|AAH18706.1|  480|Homo sapiens TNS4 protein protein.
          Length = 480

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 55  SRFIHSPSHSKNDMYT*DQIDLEYDPLKIRAPAQSQAGPGGPRDPH 192
           SR + SP++S + +++   + L   P   +AP       G PR PH
Sbjct: 69  SRSLESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPH 114


>AM233768-1|CAJ84041.1|  123|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 123

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 182 RGPPGPACDWAGARIFRGS--YSKSI*SHVYIS 90
           R PPG   +W G+  +RGS  YS S+ S V +S
Sbjct: 39  RQPPGKGLEWIGSVYYRGSTYYSPSLKSRVTMS 71


>AK027856-1|BAB55413.1|  480|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
           TENSIN. ).
          Length = 480

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 55  SRFIHSPSHSKNDMYT*DQIDLEYDPLKIRAPAQSQAGPGGPRDPH 192
           SR + SP++S + +++   + L   P   +AP       G PR PH
Sbjct: 69  SRSLESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPH 114


>AF417488-1|AAN32666.1|  715|Homo sapiens C-terminal tensin-like
           protein protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 55  SRFIHSPSHSKNDMYT*DQIDLEYDPLKIRAPAQSQAGPGGPRDPH 192
           SR + SP++S + +++   + L   P   +AP       G PR PH
Sbjct: 304 SRSLESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPH 349


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,850,467
Number of Sequences: 237096
Number of extensions: 2260756
Number of successful extensions: 7565
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7553
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)