Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1745
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    28   0.37 
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   4.6  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -2

Query: 369 INTLFLCIYCVKIVFGTKNVFIKSP 295
           ++ LFL I+ + +VFGT  + +++P
Sbjct: 656 LDRLFLWIFTIAVVFGTAGIILQAP 680


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 378 NVYINTLFLCIYCVKIVFGTKNVFIKSP 295
           ++ ++  FL ++ +  +FGT  +  +SP
Sbjct: 458 SMVLDRFFLWVFTISCIFGTFGIIFQSP 485


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,158
Number of Sequences: 2352
Number of extensions: 13859
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)