Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1745
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 29 0.049
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 29 0.049
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 29 0.049
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 29 0.049
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.26
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 26 0.45
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 24 1.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 1.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 1.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 1.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 4.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 7.4
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 29.1 bits (62), Expect = 0.049
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKLFYNI 635
E+ RE + I S + ++N+ Y +NY + KKL+YNI
Sbjct: 74 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 29.1 bits (62), Expect = 0.049
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKLFYNI 635
E+ RE + I S + ++N+ Y +NY + KKL+YNI
Sbjct: 74 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 29.1 bits (62), Expect = 0.049
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKLFYNI 635
E+ RE + I S + ++N+ Y +NY + KKL+YNI
Sbjct: 74 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 29.1 bits (62), Expect = 0.049
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKLFYNI 635
E+ RE + I S + ++N+ Y +NY + KKL+YNI
Sbjct: 74 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNI 112
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.26
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 748 KRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKLFYNII 632
+RE R+ S IS L N N KKL+YNII
Sbjct: 303 RRERERSKESKIISSLSNKTIHNNNNYKNYNKKLYYNII 341
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.45
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 748 KRETTRAIVSYYISVLYNSI-YFFNYLIDKLKKKLFYNI 635
+RE R+ IS L NS Y NY + KKL+YNI
Sbjct: 292 RRERERSKEPKIISSLSNSCNYSNNYYNNNNYKKLYYNI 330
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -3
Query: 452 QQTKSRSGVALLNKPCTFSNNYEFSMYISILYFYV 348
+++K ++ L+ C +SNNY + LY+ +
Sbjct: 296 ERSKEPKIISSLSNSCNYSNNYYNNNNYKKLYYNI 330
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 760 FGEQKRETTRAIVSYYISVLYNSIYFFNYLIDKLKKKL 647
FG+ T+ +++Y+I + +NS+ F +L K L
Sbjct: 7 FGKNFPSTSFILINYFIFLYFNSLVRFRRFTIELDKVL 44
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.8
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 280 HRKYTQTARI*LDKTVEQ---KQRRVVQ-YTNSLKYQNNIIKKI*CTFVIQSYFYCANVE 113
+RKY +T++ E+ K+ +++ +N+ Y NN KK+ C + Y+ +E
Sbjct: 56 YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIE 115
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.8
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 280 HRKYTQTARI*LDKTVEQ---KQRRVVQ-YTNSLKYQNNIIKKI*CTFVIQSYFYCANVE 113
+RKY +T++ E+ K+ +++ +N+ Y NN KK+ C + Y+ +E
Sbjct: 56 YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIE 115
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.8
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 280 HRKYTQTARI*LDKTVEQ---KQRRVVQ-YTNSLKYQNNIIKKI*CTFVIQSYFYCANVE 113
+RKY +T++ E+ K+ +++ +N+ Y NN KK+ C + Y+ +E
Sbjct: 56 YRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIE 115
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLK-----KKLFYNII 632
E+ RE + I S + ++N+ Y +NY + KKL+YNII
Sbjct: 73 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNII 117
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -1
Query: 754 EQKRETTRAIVSYYISVLYNSIYFFNYLIDKLK-----KKLFYNII 632
E+ RE + I S + ++N+ Y +NY + KKL+YNII
Sbjct: 73 ERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNII 117
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 214 LSSVFVQLFCLIRSLLFECI 273
L S V FCL+ + FECI
Sbjct: 445 LDSYAVSGFCLLFLMFFECI 464
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 214 LSSVFVQLFCLIRSLLFECI 273
L S V FCL+ + FECI
Sbjct: 498 LDSYAVSGFCLLFLMFFECI 517
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 302 NHLSMNHTQKIHSNSKD 252
NH + NH Q HS+ D
Sbjct: 423 NHYNHNHNQARHSSKSD 439
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 697 NSIYFFNYLIDKLKKKLFYNII 632
N+ + NY + KKL+YNII
Sbjct: 307 NNYNYKNYNNNYNSKKLYYNII 328
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 697 NSIYFFNYLIDKLKKKLFYNII 632
N+ + NY + KKL+YNII
Sbjct: 318 NNYNYKNYNNNYNSKKLYYNII 339
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 546 CCVLRIKNKININYPPSIFI-SKCRS 620
C V R K KI+++YP + + +KC +
Sbjct: 332 CSVKREKIKISVSYPSTETLNTKCNT 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,999
Number of Sequences: 438
Number of extensions: 4343
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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