Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1740
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    30   3.3  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    30   3.3  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    30   3.3  
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    30   4.4  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    30   4.4  

>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p
           protein.
          Length = 1296

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 753 LFEKDLLAEHNKDENEQSNCSSSTRTQNYDSD 658
           +F+  +LA+  K + E+ NC SS    NY SD
Sbjct: 245 IFQGSVLADIRKKDYEKYNCKSSLYDMNYKSD 276


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
           isoform B protein.
          Length = 1788

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 753 LFEKDLLAEHNKDENEQSNCSSSTRTQNYDSD 658
           +F+  +LA+  K + E+ NC SS    NY SD
Sbjct: 737 IFQGSVLADIRKKDYEKYNCKSSLYDMNYKSD 768


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
           isoform A protein.
          Length = 1788

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 753 LFEKDLLAEHNKDENEQSNCSSSTRTQNYDSD 658
           +F+  +LA+  K + E+ NC SS    NY SD
Sbjct: 737 IFQGSVLADIRKKDYEKYNCKSSLYDMNYKSD 768


>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
           protein.
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 753 LFEKDLLAEHNKDENEQSNCSSSTRTQNYDSD 658
           +F+  +LA+  K + E+ NC SS    NY++D
Sbjct: 739 IFQGSVLADIRKKDYEKYNCKSSLYDMNYNAD 770


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
           D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 753 LFEKDLLAEHNKDENEQSNCSSSTRTQNYDSD 658
           +F+  +LA+  K + E+ NC SS    NY++D
Sbjct: 739 IFQGSVLADIRKKDYEKYNCKSSLYDMNYNAD 770


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,550,988
Number of Sequences: 53049
Number of extensions: 649147
Number of successful extensions: 1324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)