Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1731
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118503-1|AAM49872.1|  935|Drosophila melanogaster LD09921p pro...    30   4.6  
AE014297-2087|AAF55228.2| 1249|Drosophila melanogaster CG4606-PA...    30   4.6  
AB120954-1|BAC92711.1| 1249|Drosophila melanogaster alpha-mannos...    30   4.6  
AB018079-1|BAA75817.1| 1249|Drosophila melanogaster alpha-mannos...    30   4.6  
AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA...    29   8.1  

>AY118503-1|AAM49872.1|  935|Drosophila melanogaster LD09921p
           protein.
          Length = 935

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 178 FKIYYKGTTKLISLSSVFLDLVLCILY 258
           FK++ +G+ + I L S F+ ++LC+ Y
Sbjct: 3   FKLFRRGSARCIGLLSAFVTILLCLYY 29


>AE014297-2087|AAF55228.2| 1249|Drosophila melanogaster CG4606-PA
           protein.
          Length = 1249

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 178 FKIYYKGTTKLISLSSVFLDLVLCILY 258
           FK++ +G+ + I L S F+ ++LC+ Y
Sbjct: 3   FKLFRRGSARCIGLLSAFVTILLCLYY 29


>AB120954-1|BAC92711.1| 1249|Drosophila melanogaster
           alpha-mannosidase protein.
          Length = 1249

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 178 FKIYYKGTTKLISLSSVFLDLVLCILY 258
           FK++ +G+ + I L S F+ ++LC+ Y
Sbjct: 3   FKLFRRGSARCIGLLSAFVTILLCLYY 29


>AB018079-1|BAA75817.1| 1249|Drosophila melanogaster
           alpha-mannosidase protein.
          Length = 1249

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 178 FKIYYKGTTKLISLSSVFLDLVLCILY 258
           FK++ +G+ + I L S F+ ++LC+ Y
Sbjct: 3   FKLFRRGSARCIGLLSAFVTILLCLYY 29


>AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA
           protein.
          Length = 548

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 142 LIIIFGTFRWIVFKIYYKGTTKLISLSSVFLDLVLC-ILYSTP 267
           L+ +    RW +F +Y      LI +S++   LVLC I Y+ P
Sbjct: 55  LVSVTEILRWTLFSVYSSVLMLLIRVSTMGFGLVLCHIHYNNP 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,590,194
Number of Sequences: 53049
Number of extensions: 721350
Number of successful extensions: 2041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)