Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1729
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.1  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   9.5  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 142 FCPECQGLKANFSSRLKKNV*TPREKSRTRDKTIRGRDVLL 264
           FC  C  ++ N  +R K    T R +   RD+  R   +L+
Sbjct: 286 FCYICVSIRLNDRARTKPGSKTSRREEADRDRKKRTNRMLI 326


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 290 IVYYAPREKSRTSRPRI-VLSRVLLFSLGVYTFFFK 186
           I YY PR++ R    RI VL+ + L+SL ++  F K
Sbjct: 393 IEYYHPRKQLRIQLARIMVLNMLNLYSL-IFALFDK 427


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 126 GENRVLLSRVPGTKSELFIPFKKKCIN 206
           GENR+L S++  TK  L +     C+N
Sbjct: 309 GENRMLHSQMKVTKMLLIVSSVFVCLN 335


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,075
Number of Sequences: 2352
Number of extensions: 10177
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)