Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1723
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.3  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    23   4.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.3  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    23   4.3  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   4.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   4.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   5.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.7  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   7.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   7.5  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 668 SKSSAYWSVLTLPLREASRFMRIY 739
           S++S+Y SVLT+      R++ IY
Sbjct: 114 SETSSYVSVLTIVAFSIERYLAIY 137


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 103 EHSKFIIILFTLSYGLCWNVWIIRTGLIN 17
           E+   I   + +   +C  +W++ +GLIN
Sbjct: 114 ENCSGITSAYKIEIDMCDRLWVLDSGLIN 142


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 336 KGWAPHQTPERQRNIFRIFSHL 401
           +G  P  +PE  R I ++ SH+
Sbjct: 77  RGACPQCSPEETRQIKKVLSHI 98


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 717 ASLRGKVNTLQYADDLLLYVSGDSIDNMSDTVTYSLKLLKVW 592
           +S +G   T +Y    LLYVSG     ++   TY++ L   W
Sbjct: 216 SSFQGPPFTYRYGFSFLLYVSGFITTEVAG--TYAIFLYISW 255


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 336 KGWAPHQTPERQRNIFRIFSHL 401
           +G  P  +PE  R I ++ SH+
Sbjct: 77  RGACPQCSPEETRQIKKVLSHI 98


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 406 SDKCEKILNILRCL 365
           SD C KI N+ +C+
Sbjct: 120 SDNCNKIYNLAKCV 133


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 406 SDKCEKILNILRCL 365
           SD C KI N+ +C+
Sbjct: 120 SDNCNKIYNLAKCV 133


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 406 SDKCEKILNILRCL 365
           SDKCEK    ++C+
Sbjct: 119 SDKCEKSFMFMKCM 132


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 710 LGVKLTHSNMQMIYSSMS 657
           LG+ L+H    + YS+MS
Sbjct: 251 LGMALSHKTQNLYYSAMS 268


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 406 SDKCEKILNILRCLS 362
           +DKCE  LN + C S
Sbjct: 125 TDKCENGLNFIICFS 139


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 729 MNLEASLRGKVNTLQYA 679
           MNLE S R K NT++ A
Sbjct: 468 MNLEISTRPKSNTVENA 484


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,848
Number of Sequences: 438
Number of extensions: 4949
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)