Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1718
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058653-1|AAL13882.1| 1207|Drosophila melanogaster LD35434p pro...    29   4.0  
AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B pro...    29   4.0  
AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM...    29   4.0  
AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE...    29   4.0  
AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA...    29   4.0  
AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD...    29   4.0  
AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p pro...    28   9.1  
AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA...    28   9.1  

>AY058653-1|AAL13882.1| 1207|Drosophila melanogaster LD35434p
           protein.
          Length = 1207

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522 NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
           N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 123 NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 158


>AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B protein.
          Length = 2497

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522  NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
            N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 962  NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997


>AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO A
            protein.
          Length = 3201

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522  NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
            N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 962  NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997


>AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE,
            isoform E protein.
          Length = 2497

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522  NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
            N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 962  NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997


>AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA,
            isoform A protein.
          Length = 3198

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522  NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
            N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 962  NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997


>AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD,
            isoform D protein.
          Length = 3183

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 522  NFTPHLIYVESEIFLNYRMLRKLYKPLF*KILYWCS 629
            N+ PHLI V S + LN+ M  K + P F  + Y+ S
Sbjct: 962  NWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997


>AY071223-1|AAL48845.1|  157|Drosophila melanogaster RE26473p
           protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +2

Query: 35  VLRSQYSYNGCPTLQTETHYCFTAEIGKAVVPTRPDSQEVLPPVITQ 175
           +LR QY    C  + T T  C           T P  Q V PPV +Q
Sbjct: 43  LLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


>AE014134-347|AAF51298.1|  157|Drosophila melanogaster CG15382-PA
           protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +2

Query: 35  VLRSQYSYNGCPTLQTETHYCFTAEIGKAVVPTRPDSQEVLPPVITQ 175
           +LR QY    C  + T T  C           T P  Q V PPV +Q
Sbjct: 43  LLRYQYDRQVCNNIITYTESCSPTPPPAVADNTTPKDQTVRPPVASQ 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,902,617
Number of Sequences: 53049
Number of extensions: 645996
Number of successful extensions: 1268
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)