Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1714
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020863-1|AAH20863.1|  351|Homo sapiens hydroxyacid oxidase 2 (...    33   1.6  
AY513277-1|AAT08030.1|  351|Homo sapiens growth-inhibiting prote...    33   1.6  
AL359553-3|CAC19798.1|  351|Homo sapiens hydroxyacid oxidase 2 (...    33   1.6  
AL359553-1|CAI23077.1|  364|Homo sapiens hydroxyacid oxidase 2 (...    33   1.6  
AF231917-1|AAF40200.1|  351|Homo sapiens long-chain 2-hydroxy ac...    33   1.6  
AF203975-1|AAF14000.1|  351|Homo sapiens long-chain L-2-hydroxy ...    33   1.6  

>BC020863-1|AAH20863.1|  351|Homo sapiens hydroxyacid oxidase 2
           (long chain) protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 198 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 241


>AY513277-1|AAT08030.1|  351|Homo sapiens growth-inhibiting protein
           16 protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 198 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 241


>AL359553-3|CAC19798.1|  351|Homo sapiens hydroxyacid oxidase 2
           (long chain) protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 198 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 241


>AL359553-1|CAI23077.1|  364|Homo sapiens hydroxyacid oxidase 2
           (long chain) protein.
          Length = 364

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 211 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 254


>AF231917-1|AAF40200.1|  351|Homo sapiens long-chain 2-hydroxy acid
           oxidase HAOX2 protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 198 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 241


>AF203975-1|AAF14000.1|  351|Homo sapiens long-chain L-2-hydroxy
           acid oxidase protein.
          Length = 351

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -1

Query: 641 PFNTNILYNDIRYGIRILSVPIIITIMTLSYINKKKTSL*IKHNMQGI 498
           P +T++ +ND+ +   I  +PII+       + K+   L +KHN+QGI
Sbjct: 198 PISTSLCWNDLSWFQSITRLPIILK----GILTKEDAELAVKHNVQGI 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,779,859
Number of Sequences: 237096
Number of extensions: 2114616
Number of successful extensions: 3438
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)