Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1713
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    31   0.031
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.1  
AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    23   8.1  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 250 WLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMA 119
           W P   G +S + G  +E R KL+++ S P    FD R ++T A
Sbjct: 466 WSPVFMGGRSGILGRESENRRKLVTTVSTPV---FDRRNHSTRA 506


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 335 SERIPVCSDGHRGQLRTWPG 276
           S+ +PVC  GH   L+ W G
Sbjct: 811 SDEVPVCEPGH---LKLWDG 827



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 170 LRGDQFIPGFCGVTCQR*LGTSGCRQPSFNGDP 268
           ++GD  +PGF GV   +  GT+G   P   G P
Sbjct: 374 VKGDMGVPGFPGVKGDK--GTTGL--PGIPGPP 402


>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 208 YLSTMTWYQRLSATIFQWRPSPDPGQVRSCPRCPSL 315
           Y + + W +RLS T+ ++      G V     C SL
Sbjct: 184 YPALVAWIERLSRTLPEYDQLNQEGAVEFAEICESL 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,695
Number of Sequences: 2352
Number of extensions: 17359
Number of successful extensions: 74
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)