Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1713
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 37 0.069
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 34 0.49
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 34 0.49
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.64
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 33 0.64
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 33 0.64
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 33 0.64
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 33 0.64
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.64
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 33 0.64
BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for MG... 32 1.5
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 31 2.6
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 31 2.6
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 31 3.4
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 31 4.5
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 31 4.5
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 31 4.5
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 31 4.5
BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence si... 31 4.5
AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence si... 31 4.5
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 31 4.5
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 31 4.5
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 31 4.5
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 31 4.5
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 31 4.5
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 31 4.5
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 31 4.5
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 31 4.5
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conser... 31 4.5
AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conser... 31 4.5
BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for IM... 30 6.0
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 30 7.9
AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated prot... 30 7.9
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 25 9.5
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 36.7 bits (81), Expect = 0.069
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 178 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLL 35
SSQ+ + FDG GY+ + L Q+++ F T++PNGL+ L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.49
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 148 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 14
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 379 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 423
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 33.9 bits (74), Expect = 0.49
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 148 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 14
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 567 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 611
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 795 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 849
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDIPRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 33.5 bits (73), Expect = 0.64
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 193 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 35
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1066 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1120
>BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for
MGC:164982) protein.
Length = 788
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 280 QDPARVSIERWLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYL 104
Q P++ + L + GT+ S+ G P+ ++ + S FDGR + GR YL
Sbjct: 719 QAPSKPAQALLLNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYL 777
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = -3
Query: 247 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 68
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2214 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2273
Query: 67 TYAPNGLIYLLKASVFEAT 11
A G I+ + S + T
Sbjct: 2274 RDAATGGIFAIAFSAYPLT 2292
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = -3
Query: 247 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 68
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2212 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2271
Query: 67 TYAPNGLIYLLKASVFEAT 11
A G I+ + S + T
Sbjct: 2272 RDAATGGIFAIAFSAYPLT 2290
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -2
Query: 527 TYNALMIHALNITGTI*HTNSHSLRNTRTS*KHTLTHVTHSQHFNTISNISHYR 366
T+ IH +IT + +S ++ NT T HT T TH H ++I+ Y+
Sbjct: 6 THTTHTIHTQHITYHSHNPHSPTIHNTHTHHSHTHTIWTHHTHTTHTTHINSYK 59
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1305 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1338
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1301 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1334
>BC047881-1|AAH47881.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 145 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIFQWRPSPDP 279
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AL138824-5|CAI12251.1| 413|Homo sapiens family with sequence
similarity 8, member A1 protein.
Length = 413
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 145 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIFQWRPSPDP 279
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1305 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1338
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1305 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1338
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1305 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1338
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1306 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1339
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 173 RGDQFIPGFCGVTCQR*LGTSGCR-QPSFNGDPRRI 277
+GDQ IPGF G+ + LG G R +P F G P ++
Sbjct: 1305 KGDQGIPGFSGLPGE--LGLKGMRGEPGFMGTPGKV 1338
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 403 CECVTCVSVCFYDVRVLRSECEFVCYIVPVIFSACIMSAL*VYCM 537
C CV CV VC V V C VC V V C++S C+
Sbjct: 11 CVCV-CVCVCVLCVSVCVCVCLCVCVCVCVCLCLCVLSVSVCLCV 54
Score = 29.9 bits (64), Expect = 7.9
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 373 CEILEIVLKCCECV-TCVSVCF-YDVRVLRSECEFVCYIVPVIFSACI 510
C + + L C CV CVSVCF V V C +C V V C+
Sbjct: 104 CLCVCVCLHLCVCVGLCVSVCFCVSVCVCLCVCVCICVFVCVWVCVCL 151
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 30.7 bits (66), Expect = 4.5
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -3
Query: 607 SVCLKIIIFLHY*QHNNDLYH-ITAYNKLITHS*YTH*I*PALYNTQTHTHFV-TRAH-- 440
+VC + H H LY I+ Y TH+ +TH T THTH V T A+
Sbjct: 51 AVCTSLHTHTH--THTLSLYWLISLYIHTHTHT-HTHTHAVLYLPTHTHTHAVLTLAYLP 107
Query: 439 -HKNTHSHM*RTHNTSTQFLIFHT 371
H +TH+H TH S L HT
Sbjct: 108 IHTHTHTH---THTLSCTSLYTHT 128
>AF097027-1|AAF07850.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 145 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIFQWRPSPDP 279
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>AF097026-1|AAF07849.1| 413|Homo sapiens autosomal highly conserved
protein protein.
Length = 413
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 145 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIFQWRPSPDP 279
R L + R ++ W+ SY +TW+ L+A P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148
>BC009732-1|AAH09732.1| 354|Homo sapiens Unknown (protein for
IMAGE:3877337) protein.
Length = 354
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 271 ARVSIERWLPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRF 146
A VSI P T G+ S+TGN R KL+ S + F
Sbjct: 306 AEVSIASLRPETVGSADSITGNFGTERPKLLGPPSTQLRFHF 347
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +1
Query: 373 CEILEIVLKCCECVTCVSVCFYDVRVLRSECEFVCYIVPVIFSACIMSAL*VYCML*YGT 552
C + I + CEC C C Y VR+ EC+ C V C + V +
Sbjct: 74 CMTVHICARVCEC-AC--ACVY-VRMSVHECKCACVYVCKRVCTCACVCMCVQVCMCASV 129
Query: 553 NHCYVVNSVRIL 588
+ C V SVR++
Sbjct: 130 HMCIVCVSVRVV 141
>AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated protein
protein.
Length = 365
Score = 29.9 bits (64), Expect = 7.9
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +1
Query: 265 PSP-DPGQVRSC-PRCPSLHTGIRSECRSPC--SRPKKR*CEILEIVLK--CCECVTCVS 426
PSP G SC P C +S C+ C S P ++ C + + K CC+ V CVS
Sbjct: 74 PSPCQSGCTSSCTPSCCQ-----QSSCQLACCASSPCQQAC-CVPVCCKTVCCKPVCCVS 127
Query: 427 VCFYDVRVL-RSECEFVCYIVPVIFSAC 507
VC D +S C+ C AC
Sbjct: 128 VCCGDSSCCQQSSCQSACCTSSPCQQAC 155
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 24.6 bits (51), Expect(2) = 9.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 262 RPSPDPGQVRSCPRCP 309
RP PGQ CPRCP
Sbjct: 527 RPQSGPGQC--CPRCP 540
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 283 QVRSCPRCPSLHTGIRSECRSPCS 354
Q R CPR P H + C + CS
Sbjct: 575 QPRPCPRAPCAHPLPGTCCPNDCS 598
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,634,169
Number of Sequences: 237096
Number of extensions: 2539140
Number of successful extensions: 6118
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6073
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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