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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1712X
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.        37   0.024
BC062318-1|AAH62318.1|  559|Homo sapiens LAMA1 protein protein.        34   0.17 
BC039051-1|AAH39051.1|  747|Homo sapiens LAMA1 protein protein.        34   0.17 
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.       33   0.23 
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.        33   0.23 
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.             33   0.23 
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro...    33   0.23 
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.        33   0.23 
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.     33   0.23 
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p...    33   0.23 
BC146674-1|AAI46675.1|  788|Homo sapiens Unknown (protein for MG...    31   1.6  
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ...    31   1.6  
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.        31   1.6  
S51236-1|AAB24637.1|  887|Homo sapiens collagen VII protein.           30   2.1  
M96984-1|AAA36357.1|  884|Homo sapiens type VII collagen protein.      30   2.1  
M65158-1|AAA96439.1|  625|Homo sapiens type VII collagen protein.      30   2.1  
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.      30   2.1  
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen...    30   2.1  
D13694-1|BAA02853.1| 1080|Homo sapiens type VII collagen protein.      30   2.1  
BC047881-1|AAH47881.1|  413|Homo sapiens family with sequence si...    30   2.8  
AL138824-5|CAI12251.1|  413|Homo sapiens family with sequence si...    30   2.8  
AF097027-1|AAF07850.1|  413|Homo sapiens autosomal highly conser...    30   2.8  
AF097026-1|AAF07849.1|  413|Homo sapiens autosomal highly conser...    30   2.8  
AK128761-1|BAC87604.1|  215|Homo sapiens protein ( Homo sapiens ...    29   4.9  
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           25   6.1  
BC009732-1|AAH09732.1|  354|Homo sapiens Unknown (protein for IM...    29   6.5  
AL355178-2|CAI23435.1|  426|Homo sapiens CUB and Sushi multiple ...    28   8.6  
AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple ...    28   8.6  
AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple ...    28   8.6  
AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens ...    28   8.6  

>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
          Length = 2628

 Score = 36.7 bits (81), Expect = 0.024
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -2

Query: 176  SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            SSQ+    + FDG GY+ +     L     Q+++ F T++PNGL+  L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345


>BC062318-1|AAH62318.1|  559|Homo sapiens LAMA1 protein protein.
          Length = 559

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 146 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 12
           FDG GYA +   GY       + L FRT + NG++  +  +  +A
Sbjct: 379 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 423


>BC039051-1|AAH39051.1|  747|Homo sapiens LAMA1 protein protein.
          Length = 747

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 146 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 12
           FDG GYA +   GY       + L FRT + NG++  +  +  +A
Sbjct: 567 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 611


>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
          Length = 1823

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091


>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
          Length = 1816

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084


>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
          Length = 1581

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
           RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 795 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 849


>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
          Length = 1816

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDIPRRGKFGQVTRFDIEVRTPADNGLILLM 1084


>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
          Length = 1816

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084


>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
          Length = 1823

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091


>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
            protein.
          Length = 1852

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 191  RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 33
            RDKL  +QS    Y FDG GYA +    R     Q  +  +  RT A NGLI L+
Sbjct: 1066 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1120


>BC146674-1|AAI46675.1|  788|Homo sapiens Unknown (protein for
           MGC:164982) protein.
          Length = 788

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -2

Query: 278 QDPARVSITRWLPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYL 102
           Q P++ +    L +  GT+  + G    P+ ++  + S      FDGR   +  GR YL
Sbjct: 719 QAPSKPAQALLLNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYL 777


>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
            domains 2 protein.
          Length = 3487

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = -2

Query: 245  LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
            +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 2214 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2273

Query: 65   TYAPNGLIYLLKASVFEAT 9
              A  G I+ +  S +  T
Sbjct: 2274 RDAATGGIFAIAFSAYPLT 2292


>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
          Length = 3631

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = -2

Query: 245  LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
            +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 2212 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2271

Query: 65   TYAPNGLIYLLKASVFEAT 9
              A  G I+ +  S +  T
Sbjct: 2272 RDAATGGIFAIAFSAYPLT 2290


>S51236-1|AAB24637.1|  887|Homo sapiens collagen VII protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
           T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 605 TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 657


>M96984-1|AAA36357.1|  884|Homo sapiens type VII collagen protein.
          Length = 884

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
           T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 602 TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 654


>M65158-1|AAA96439.1|  625|Homo sapiens type VII collagen protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
           T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 159 TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 211


>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
          Length = 2912

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215  TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
            T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 973  TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 1025


>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
            protein.
          Length = 2944

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215  TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
            T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 973  TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 1025


>D13694-1|BAA02853.1| 1080|Homo sapiens type VII collagen protein.
          Length = 1080

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 TMTW--YQRLSATIL*WRPSPDPGQDRSCPRCPSLHTGIRSECRSPCTRPKKRYV 373
           T+ W    R S+ IL WRP   PGQ+   P  P    GI S  R     P   Y+
Sbjct: 778 TLAWTPVSRASSYILSWRPLRGPGQE--VPGSPQTLPGISSSQRVTGLEPGVSYI 830


>BC047881-1|AAH47881.1|  413|Homo sapiens family with sequence
           similarity 8, member A1 protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIL*WRPSPDP 277
           R   L  +   R ++ W+  SY   +TW+  L+A      P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148


>AL138824-5|CAI12251.1|  413|Homo sapiens family with sequence
           similarity 8, member A1 protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIL*WRPSPDP 277
           R   L  +   R ++ W+  SY   +TW+  L+A      P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148


>AF097027-1|AAF07850.1|  413|Homo sapiens autosomal highly conserved
           protein protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIL*WRPSPDP 277
           R   L  +   R ++ W+  SY   +TW+  L+A      P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148


>AF097026-1|AAF07849.1|  413|Homo sapiens autosomal highly conserved
           protein protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 RTCTLEGQTARRSIYPWVLWSYLSTMTWYQRLSATIL*WRPSPDP 277
           R   L  +   R ++ W+  SY   +TW+  L+A      P P P
Sbjct: 104 RPARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSP 148


>AK128761-1|BAC87604.1|  215|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45064 fis, clone BRAWH3024242. ).
          Length = 215

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 269 PDPGQDRSCPRCPSLHTGIRSECRS-PCTRP 358
           P P  D S P CP LH    S CR  P + P
Sbjct: 157 PAPLSDLSLPGCPCLHPSSPSHCRCLPTSHP 187


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 24.6 bits (51), Expect(2) = 6.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 260 RPSPDPGQDRSCPRCP 307
           RP   PGQ   CPRCP
Sbjct: 527 RPQSGPGQ--CCPRCP 540



 Score = 22.6 bits (46), Expect(2) = 6.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 281 QDRSCPRCPSLHTGIRSECRSPCT 352
           Q R CPR P  H    + C + C+
Sbjct: 575 QPRPCPRAPCAHPLPGTCCPNDCS 598


>BC009732-1|AAH09732.1|  354|Homo sapiens Unknown (protein for
           IMAGE:3877337) protein.
          Length = 354

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 269 ARVSITRWLPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRF 144
           A VSI    P T G+   +TGN    R KL+   S    + F
Sbjct: 306 AEVSIASLRPETVGSADSITGNFGTERPKLLGPPSTQLRFHF 347


>AL355178-2|CAI23435.1|  426|Homo sapiens CUB and Sushi multiple
           domains 2 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -2

Query: 245 LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
           +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 311 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 370

Query: 65  TYAPNGLIYLLKAS 24
             A  G I+ +  S
Sbjct: 371 RDAATGGIFAIAFS 384


>AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple
            domains 2 protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -2

Query: 245  LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
            +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144

Query: 65   TYAPNGLIYLLKAS 24
              A  G I+ +  S
Sbjct: 1145 RDAATGGIFAIAFS 1158


>AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple
            domains 2 protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -2

Query: 245  LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
            +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144

Query: 65   TYAPNGLIYLLKAS 24
              A  G I+ +  S
Sbjct: 1145 RDAATGGIFAIAFS 1158


>AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45822 fis, clone NT2RP8001604, moderately  similar to
            Homo sapiens CUB and Sushi multiple domains 1 (CSMD1). ).
          Length = 1167

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = -2

Query: 245  LPTTAGTKSXLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 66
            +P   G +  L+   TEP    I+   GPQ+       +     +  +   SNQVLL F 
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144

Query: 65   TYAPNGLIYLLKAS 24
              A  G I+ +  S
Sbjct: 1145 RDAATGGIFAIAFS 1158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,335,059
Number of Sequences: 237096
Number of extensions: 1572583
Number of successful extensions: 4248
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4236
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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