Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1712X
(375 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p pro... 29 1.9
AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA... 29 1.9
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 28 3.4
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 28 3.4
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 28 3.4
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 28 3.4
AY051528-1|AAK92952.1| 532|Drosophila melanogaster GH18123p pro... 27 5.9
AL024456-3|CAA19661.1| 531|Drosophila melanogaster EG:63B12.10 ... 27 5.9
AF110234-1|AAF14250.1| 498|Drosophila melanogaster coatomer com... 27 5.9
AE014298-266|AAF45673.1| 532|Drosophila melanogaster CG14813-PA... 27 5.9
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 27 5.9
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 27 5.9
>BT025811-1|ABF85711.1| 237|Drosophila melanogaster IP01956p
protein.
Length = 237
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 65 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 199
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
>AE013599-112|AAF57306.1| 237|Drosophila melanogaster CG14468-PA
protein.
Length = 237
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 65 CGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARRSIYPWVL 199
CGR +D AS+N P G + CT G TA+ S Y W +
Sbjct: 143 CGRSSVVDYQTASSNRTWPIGSCCGKQNCT--GCTAKLSQYLWTI 185
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 356 DEYMVIGIQNGYPYVVMDIGDSSDPGQDPARVSITRWLPTTA---GTKSXLTGNSTEPRD 186
++++ + I NGYP + +D+G+ + V+ RW G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 185 KLIS-SQSG 162
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 252 KMVADNRWYQVXVDR 208
K VAD RWYQ VDR
Sbjct: 2756 KYVADGRWYQAVVDR 2770
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 356 DEYMVIGIQNGYPYVVMDIGDSSDPGQDPARVSITRWLPTTA---GTKSXLTGNSTEPRD 186
++++ + I NGYP + +D+G+ + V+ RW G + LT P
Sbjct: 966 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 1025
Query: 185 KLIS-SQSG 162
++ S+SG
Sbjct: 1026 DVVEHSKSG 1034
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 252 KMVADNRWYQVXVDR 208
K VAD RWYQ VDR
Sbjct: 995 KYVADGRWYQAVVDR 1009
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 356 DEYMVIGIQNGYPYVVMDIGDSSDPGQDPARVSITRWLPTTA---GTKSXLTGNSTEPRD 186
++++ + I NGYP + +D+G+ + V+ RW G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 185 KLIS-SQSG 162
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 252 KMVADNRWYQVXVDR 208
K VAD RWYQ VDR
Sbjct: 2756 KYVADGRWYQAVVDR 2770
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = -2
Query: 356 DEYMVIGIQNGYPYVVMDIGDSSDPGQDPARVSITRWLPTTA---GTKSXLTGNSTEPRD 186
++++ + I NGYP + +D+G+ + V+ RW G + LT P
Sbjct: 2727 NDFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMGPNAKLTIREELPNG 2786
Query: 185 KLIS-SQSG 162
++ S+SG
Sbjct: 2787 DVVEHSKSG 2795
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 252 KMVADNRWYQVXVDR 208
K VAD RWYQ VDR
Sbjct: 2756 KYVADGRWYQAVVDR 2770
>AY051528-1|AAK92952.1| 532|Drosophila melanogaster GH18123p
protein.
Length = 532
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +3
Query: 21 DRRLEKVYQAVRSVRAEEEKHLIR-----LRRQITSASHRG 128
D EKVYQAVR + + + +R L+RQ AS RG
Sbjct: 137 DSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRG 177
>AL024456-3|CAA19661.1| 531|Drosophila melanogaster EG:63B12.10
protein.
Length = 531
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +3
Query: 21 DRRLEKVYQAVRSVRAEEEKHLIR-----LRRQITSASHRG 128
D EKVYQAVR + + + +R L+RQ AS RG
Sbjct: 137 DSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRG 177
>AF110234-1|AAF14250.1| 498|Drosophila melanogaster coatomer
complex COPI delta-COPsubunit protein.
Length = 498
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +3
Query: 21 DRRLEKVYQAVRSVRAEEEKHLIR-----LRRQITSASHRG 128
D EKVYQAVR + + + +R L+RQ AS RG
Sbjct: 104 DSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRG 144
>AE014298-266|AAF45673.1| 532|Drosophila melanogaster CG14813-PA
protein.
Length = 532
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +3
Query: 21 DRRLEKVYQAVRSVRAEEEKHLIR-----LRRQITSASHRG 128
D EKVYQAVR + + + +R L+RQ AS RG
Sbjct: 137 DSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRG 177
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 272 DPGQDRSCPRCPSLHTGIRSECRSPCTR 355
DP + S CP+ + S CRSPC R
Sbjct: 2434 DPNECLSDADCPASASCQNSRCRSPCER 2461
>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
isoform B protein.
Length = 1209
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 308 MDIGDSSDPGQDPARVSITRWLPTTAGTKSXLTGNSTEPRDK 183
MD GD + G+ A + TTA K+ ++ ++TE K
Sbjct: 619 MDTGDGNSDGEKGAAAEVDLTTETTATAKTLVSSSTTEAMRK 660
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,200,665
Number of Sequences: 53049
Number of extensions: 436956
Number of successful extensions: 1609
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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