Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1705
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 65 3e-11
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 45 4e-05
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 45 4e-05
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 40 0.002
Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical pr... 33 0.13
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 32 0.40
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 2.8
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 2.8
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 2.8
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 29 3.7
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 29 3.7
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 4.9
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 65.3 bits (152), Expect = 3e-11
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 4 QCVKLMIATAIFFTYSLQFYVPMEIIWNNV-RHWFGAKKNLAEYSIRIALIVMTVCIAIA 180
Q +K+M I +Y LQFYVPME + + R AK+ Y+IR +++T +A
Sbjct: 313 QAIKVMFVLCILVSYPLQFYVPMERVEKWIKRKVVEAKQEPMIYAIRFGGVLLTCAMAQL 372
Query: 181 IPDLGPFISLVGAVCLSFLGLIFPALWKLLPS 276
IP L FISLVG+V + L L+FP L +LL S
Sbjct: 373 IPHLALFISLVGSVAGTSLTLVFPPLIELLCS 404
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/30 (43%), Positives = 24/30 (80%)
Frame = +3
Query: 309 WVLWKNVFMISFGILGFLTGSYVSIVEVIE 398
WV +N+ +++F ++GF TG+Y S+V++IE
Sbjct: 413 WVWIRNIGLMAFAMVGFTTGTYASMVQIIE 442
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 4 QCVKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGA-KKNLAEYSIRIALIVMTVCIAIA 180
Q +KLM I +Y LQFYVPME I + K+ L Y R + +++T IA
Sbjct: 323 QTIKLMFVACIMISYPLQFYVPMERIEKWITRKIPVDKQTLYIYIARYSGVILTCAIAEL 382
Query: 181 IPDLGPFISLVGAVCLSFLGLIFPALWKLLPS 276
IP L FISL+GA + + L+FP +LL S
Sbjct: 383 IPHLALFISLIGAFSGASMALLFPPCIELLTS 414
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 249 PCIMETVTFWDRPNGLGRFNWVLWKNVFMISFGILGFLTGSYVSIVEV 392
PCI E +T + + N L W+ KN+ +++F +GF TG+Y +++E+
Sbjct: 407 PCI-ELLTSYAK-NELSTGLWI--KNIVLLTFAFIGFTTGTYSALIEI 450
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/86 (26%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +1
Query: 10 VKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGAKKNLAE----YSIRIALIVMTVCIAI 177
+K ++ IFF ++Q YV ++++ ++R + + Y++R+ L+++++CIA+
Sbjct: 342 IKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMVHRLLPYALRLGLMLISLCIAL 401
Query: 178 AIPDLGPFISLVGAVCLSFLGLIFPA 255
+P+L I LVG + LI P+
Sbjct: 402 IVPNLMQIIPLVGITSGLLISLILPS 427
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Frame = +1
Query: 10 VKLMIATAIFFTYSLQFYVPMEIIWNNV---------RHWFGAKKNLAEYSI--RIALIV 156
V L++ +Y L FY ++++ NN+ + K+L E+++ RI L++
Sbjct: 344 VNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVL 403
Query: 157 MTVCIAIAIPDLGPFISLVGAVCLSFLGLIFPALWKL 267
T+ +A+++P L + LVG + + L I+PAL+ L
Sbjct: 404 FTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHL 440
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Frame = +1
Query: 10 VKLMIATAIFFTYSLQFYVPMEIIWNNV---------RHWFGAKKNLAEYSI--RIALIV 156
V L++ +Y L FY ++++ NN+ + K+L E+++ RI L++
Sbjct: 344 VNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVL 403
Query: 157 MTVCIAIAIPDLGPFISLVGAVCLSFLGLIFPALWKL 267
T+ +A+++P L + LVG + + L I+PAL+ L
Sbjct: 404 FTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHL 440
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = +1
Query: 49 SLQFYVPMEIIWNNVRHWFGAK-----KNLAEYSIRIALIVMTVCIAIAIPDLGPFISLV 213
S+ YV ++ +N R FGA+ K L++ R+ +++T +A+ IP L I LV
Sbjct: 329 SIAMYVVYDMFFNGFRRKFGARFPNVPKWLSDKGFRVFWVLVTYLMAVLIPKLEIMIPLV 388
Query: 214 GAVCLSFLGLIFPALWKLLPSGTD 285
G + LIFP ++++ TD
Sbjct: 389 GVTSGALCALIFPPFFEMITFWTD 412
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 4 QCVKLMIATAIFFTYSLQFYVPMEIIWN--NVRHWFGAKKNLAEYSIRIALIVMTVCIAI 177
Q V LMIA + T + P++ + V H FG K+ L +R L + I +
Sbjct: 291 QTVNLMIAVHVITTIVIVMSPPIQQVEQLLKVPHKFGVKRFL----VRSILFWFVIFIGL 346
Query: 178 AIPDLGPFISLVGAVCLSFLGLIFPALWKL 267
+IP GP + L+GA + + LI P ++ L
Sbjct: 347 SIPHFGPVLDLIGASTMVLMTLILPPIFYL 376
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Frame = +1
Query: 1 GQCVKLMIATAIFFTYSLQFYVPMEIIW----NNVRHWFGAK---KNLAEYSIRIALIVM 159
G VK ++ ++ + +Q + + +IW +R G K + ++ R +++++
Sbjct: 295 GIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKRIVHFAFRYSIVIV 354
Query: 160 TVCIAIAIPDLGPFISLVGAVCLSFLGLIFPALWKLL 270
++ AIP L + LVG L L+FP+L+ LL
Sbjct: 355 VFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLL 391
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Frame = +1
Query: 1 GQCVKLMIATAIFFTYSLQFYVPMEIIW----NNVRHWFGAK---KNLAEYSIRIALIVM 159
G VK ++ ++ + +Q + + +IW +R G K + ++ R +++++
Sbjct: 350 GIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKRIVHFAFRYSIVIV 409
Query: 160 TVCIAIAIPDLGPFISLVGAVCLSFLGLIFPALWKLL 270
++ AIP L + LVG L L+FP+L+ LL
Sbjct: 410 VFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSLFHLL 446
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 4 QCVKLMIATAIFFTYSLQFYVPMEIIWN--NVRHWFGAKKNLAEYSIRIALIVMTVCIAI 177
Q + +MI T ++ F M+ + +V FG K+ + +R ++V V +A
Sbjct: 322 QAINIMITVHCILTLTIVFNPLMQEVEELFHVPQRFGPKRAI----VRTGIMVAVVFVAE 377
Query: 178 AIPDLGPFISLVGAVCLSFLGLIFPALW 261
++P GP + LVG L+ +I P L+
Sbjct: 378 SVPTFGPLLDLVGGSTLTLTSVIMPCLF 405
>Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical
protein H12I19.1 protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 25 ATAIFFTYSLQFYVPMEIIWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 201
AT IF S FY+P+ I + + AK++ E I IV+ +C +IAIP + F
Sbjct: 195 ATLIFIFTSAFFYIPIMISVRKLTNLTSAKQSNPEKYIFWQTIVIFICKSIAIPIIVDF 253
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 139 RIALIVMTVCIAIAIPDLGPFISLVGAVCLSFLGLIFPALWKLLPSGTDRTAW 297
R ++ + + +A+ +PD P ++LVGA + + P+L+ L W
Sbjct: 354 RTIVLFLVLFVALTVPDFQPVMNLVGASTIPMGCAVLPSLFYLYSEAATEEEW 406
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 114 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGCL 224
+E RI ++ F+C R+S+SGS++ H S+ C+
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKCV 77
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 114 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGCL 224
+E RI ++ F+C R+S+SGS++ H S+ C+
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKCV 77
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 114 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGCL 224
+E RI ++ F+C R+S+SGS++ H S+ C+
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKCV 77
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 79 IWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 201
+W +R KK L + R+ + V ++C + +P LGP+
Sbjct: 160 LWGPIRTTMAVKKLLKKARGRV-VTVASICARVGLPGLGPY 199
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 79 IWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 201
+W +R KK L + R+ + V ++C + +P LGP+
Sbjct: 185 LWGPIRTTMAVKKLLKKARGRV-VTVASICARVGLPGLGPY 224
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
protein R03G5.3 protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 79 IWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPFISLVGAVCLSFLGLIFPAL 258
I NN ++F + Y+ RI+L+ ++ C+ I + F GA+C+SFL IF +
Sbjct: 452 ISNNENYYFQTINII--YANRISLL-LSCCLYRTIAFVR-FDYGKGAMCISFLVFIFSNI 507
Query: 259 WK---LLPSGTD 285
W LL + TD
Sbjct: 508 WSFYGLLETNTD 519
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 178 AIPDLGPFISLVGAVCLSFLGLIFPALWKL 267
++P+ G ++LVG L L LIFP L+ +
Sbjct: 306 SVPNFGVVVNLVGGSTLPLLVLIFPPLFAM 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,581
Number of Sequences: 27780
Number of extensions: 336992
Number of successful extensions: 860
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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