Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1704
(657 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025010-1|ABE01240.1| 415|Drosophila melanogaster IP02589p pro... 30 3.2
AY118682-1|AAM50542.1| 408|Drosophila melanogaster AT10584p pro... 30 3.2
AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown prot... 30 3.2
AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-P... 30 3.2
AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-P... 30 3.2
AE014134-1812|AAF52895.2| 408|Drosophila melanogaster CG31873-P... 30 3.2
BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p pro... 29 4.2
AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin pr... 29 4.2
AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB... 29 4.2
AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA... 29 4.2
>BT025010-1|ABE01240.1| 415|Drosophila melanogaster IP02589p
protein.
Length = 415
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 418 INYLKYFKNNWKRCSKPTHFFIFCCPCLK 504
+NYL+ +NNWK+C+ ++ LK
Sbjct: 17 MNYLRVIRNNWKKCTFGAAVSVYALQALK 45
>AY118682-1|AAM50542.1| 408|Drosophila melanogaster AT10584p
protein.
Length = 408
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 418 INYLKYFKNNWKRCSKPTHFFIFCCPCLK 504
+NYL+ +NNWK+C+ ++ LK
Sbjct: 1 MNYLRVIRNNWKKCTFGAAVSVYALQALK 29
>AF132183-1|AAD34771.1| 834|Drosophila melanogaster unknown
protein.
Length = 834
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 355 IALHFTQKQIYLVQKQGYFYFINYLKYFKNNWKRCSKPTHFFIFCCPCLKLLYFSGDLFQ 534
I L F + ++L+ GY F+ + K+F N + +P C P + +++ + LF+
Sbjct: 560 IFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPE--TPGCAPSVLIMFINMMLFK 617
Query: 535 IKSPQK 552
P K
Sbjct: 618 NTEPPK 623
>AE014297-2518|AAF55551.2| 834|Drosophila melanogaster CG18617-PB,
isoform B protein.
Length = 834
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 355 IALHFTQKQIYLVQKQGYFYFINYLKYFKNNWKRCSKPTHFFIFCCPCLKLLYFSGDLFQ 534
I L F + ++L+ GY F+ + K+F N + +P C P + +++ + LF+
Sbjct: 560 IFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPE--TPGCAPSVLIMFINMMLFK 617
Query: 535 IKSPQK 552
P K
Sbjct: 618 NTEPPK 623
>AE014297-2517|AAF55552.2| 834|Drosophila melanogaster CG18617-PA,
isoform A protein.
Length = 834
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 355 IALHFTQKQIYLVQKQGYFYFINYLKYFKNNWKRCSKPTHFFIFCCPCLKLLYFSGDLFQ 534
I L F + ++L+ GY F+ + K+F N + +P C P + +++ + LF+
Sbjct: 560 IFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPE--TPGCAPSVLIMFINMMLFK 617
Query: 535 IKSPQK 552
P K
Sbjct: 618 NTEPPK 623
>AE014134-1812|AAF52895.2| 408|Drosophila melanogaster CG31873-PA
protein.
Length = 408
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 418 INYLKYFKNNWKRCSKPTHFFIFCCPCLK 504
+NYL+ +NNWK+C+ ++ LK
Sbjct: 1 MNYLRVIRNNWKKCTFGAAVSVYALQALK 29
>BT003245-1|AAO25002.1| 709|Drosophila melanogaster LD36812p
protein.
Length = 709
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 465 ADTFLYFLLPMPETPIFFRGSFPNQVTSKMFPKSYI 572
AD FLY L + P+F S+P + + P YI
Sbjct: 532 ADEFLYCFLQSADCPLFKAASYPGSQLTNLPPMRYI 567
>AF240470-1|AAG11414.1| 695|Drosophila melanogaster nicastrin
protein.
Length = 695
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 465 ADTFLYFLLPMPETPIFFRGSFPNQVTSKMFPKSYI 572
AD FLY L + P+F S+P + + P YI
Sbjct: 518 ADEFLYCFLQSADCPLFKAASYPGSQLTNLPPMRYI 553
>AE014297-3647|AAS65213.1| 665|Drosophila melanogaster CG7012-PB,
isoform B protein.
Length = 665
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 465 ADTFLYFLLPMPETPIFFRGSFPNQVTSKMFPKSYI 572
AD FLY L + P+F S+P + + P YI
Sbjct: 488 ADEFLYCFLQSADCPLFKAASYPGSQLTNLPPMRYI 523
>AE014297-3646|AAF56349.2| 695|Drosophila melanogaster CG7012-PA,
isoform A protein.
Length = 695
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 465 ADTFLYFLLPMPETPIFFRGSFPNQVTSKMFPKSYI 572
AD FLY L + P+F S+P + + P YI
Sbjct: 518 ADEFLYCFLQSADCPLFKAASYPGSQLTNLPPMRYI 553
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,484,044
Number of Sequences: 53049
Number of extensions: 448965
Number of successful extensions: 531
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -