Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1703
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498EC3 Cluster: hypothetical protein 225.t00005;...    35   2.3  
UniRef50_Q9D9Z9 Cluster: Adult male testis cDNA, RIKEN full-leng...    28   3.8  
UniRef50_UPI0000F1DA73 Cluster: PREDICTED: hypothetical protein;...    33   5.3  
UniRef50_A6DMX9 Cluster: N-acetylgalactosamine 6-sulfate sulfata...    33   7.0  
UniRef50_Q8LTG6 Cluster: Mitogen; n=1; Streptococcus phage phisc...    33   7.0  
UniRef50_UPI000069DFCC Cluster: UPI000069DFCC related cluster; n...    33   9.3  
UniRef50_Q16YZ9 Cluster: Sulfatase-1, sulf-1; n=3; Coelomata|Rep...    33   9.3  

>UniRef50_UPI0000498EC3 Cluster: hypothetical protein 225.t00005;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 225.t00005 - Entamoeba histolytica HM-1:IMSS
          Length = 176

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = +2

Query: 239 SHTYVLCTCNPYVKCCQWCNCILYLR*VVMIVKRL*RFYFHSSTHIRMFMCTCDPYVKCC 418
           +H   LC CN   KC   CNC    R +         +YF  S   R++ C C     CC
Sbjct: 60  THLQHLC-CNEDHKCSPQCNCYKTGRCITSCPCYFTCYYFTESI-TRLYPCQCSKGHCCC 117

Query: 419 QWCNCI 436
              +CI
Sbjct: 118 NHISCI 123


>UniRef50_Q9D9Z9 Cluster: Adult male testis cDNA, RIKEN full-length
           enriched library, clone:1700024J04 product:hypothetical
           TNFR/CD27/30/40/95 cysteine-rich region/von Willebrand
           factor, type C repeat containing protein, full insert
           sequence; n=2; Murinae|Rep: Adult male testis cDNA,
           RIKEN full-length enriched library, clone:1700024J04
           product:hypothetical TNFR/CD27/30/40/95 cysteine-rich
           region/von Willebrand factor, type C repeat containing
           protein, full insert sequence - Mus musculus (Mouse)
          Length = 199

 Score = 28.3 bits (60), Expect(2) = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 389 CTCDPYVKCCQWCNCI 436
           C C  Y +CCQ C+CI
Sbjct: 70  CWCMCYSRCCQRCSCI 85



 Score = 24.6 bits (51), Expect(2) = 3.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 257 CTCNPYVKCCQWCNCILYLR 316
           C C  Y +C + C C+ Y R
Sbjct: 58  CCCTCYGRCSERCWCMCYSR 77


>UniRef50_UPI0000F1DA73 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 1038

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -1

Query: 467 YNHYAFTSNTQCSYTTDNISHKGHTYT*TYVCELNYESKIFISALQSLRLISNTECSYTT 288
           Y+H  ++ N   SY ++N SH    Y+  Y    +Y S  +  +  +     N   SY +
Sbjct: 639 YSHSYYSDNYSHSYYSENYSHS--YYSDNY--SHSYNSDNYSHSYYNTYYSDNYSHSYNS 694

Query: 287 DNISHKGY-TYTKHTY 243
           DN SH  Y TY    Y
Sbjct: 695 DNYSHSYYNTYYSDNY 710


>UniRef50_A6DMX9 Cluster: N-acetylgalactosamine 6-sulfate sulfatase;
           n=3; Lentisphaera araneosa HTCC2155|Rep:
           N-acetylgalactosamine 6-sulfate sulfatase - Lentisphaera
           araneosa HTCC2155
          Length = 467

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -3

Query: 270 GLHVHKTYVCELNYESKTFISALQSLRLISNTQCSYTTDNIP 145
           G ++++  V EL+YE+   ++ L  L L  NT   YT+DN P
Sbjct: 214 GDNLYRAAVEELDYETGRLLNKLNQLNLSKNTLVIYTSDNGP 255


>UniRef50_Q8LTG6 Cluster: Mitogen; n=1; Streptococcus phage
           phisc1|Rep: Mitogen - Streptococcus phage phisc1
          Length = 183

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 239 SHTYVLCTCNPYVKCCQWCNCILY 310
           SH Y+ C C+    C +WC C L+
Sbjct: 101 SHRYLRCKCSSCYSCPKWCRCCLW 124


>UniRef50_UPI000069DFCC Cluster: UPI000069DFCC related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069DFCC UniRef100 entry -
           Xenopus tropicalis
          Length = 265

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +2

Query: 254 LCTCNPYVKCCQWCNCILYLR*VVMIVKRL*RFYFHSSTHIRMFMCTCDPYVKCCQWCNC 433
           LC C P  +C   C C+   +  + + +R+     H      M +C C P  +C   C C
Sbjct: 177 LCQCMPLCQCMSLCQCMPLCQ-CMPLCQRM-PLCQHMPLCPHMPLCQCMPLCQCMSLCQC 234

Query: 434 I 436
           +
Sbjct: 235 M 235


>UniRef50_Q16YZ9 Cluster: Sulfatase-1, sulf-1; n=3; Coelomata|Rep:
           Sulfatase-1, sulf-1 - Aedes aegypti (Yellowfever
           mosquito)
          Length = 250

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 470 LYNHYAFTSNTQCSYTTDNISHKGHTYT*TYVCELNYESKIF 345
           ++NH  FT+N  CS TT   +H+  ++  TY+    Y +  F
Sbjct: 105 VHNHNVFTNNDNCSSTTWQTTHETRSFA-TYLSNAGYRTGYF 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,778,264
Number of Sequences: 1657284
Number of extensions: 10365337
Number of successful extensions: 19079
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19003
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)