Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1703
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p pro...    30   3.6  
AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.     30   3.6  
AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA...    30   3.6  

>AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p
           protein.
          Length = 1006

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 470 LYNHYAFTSNTQCSYTTDNISHKGHTYT*TYVCELNYESKIF 345
           ++NH  FT+N  CS      +H+  +Y  TY+    Y +  F
Sbjct: 3   VHNHMVFTNNDNCSSPQWQATHETRSYA-TYLSNAGYRTGYF 43


>AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 470 LYNHYAFTSNTQCSYTTDNISHKGHTYT*TYVCELNYESKIF 345
           ++NH  FT+N  CS      +H+  +Y  TY+    Y +  F
Sbjct: 8   VHNHMVFTNNDNCSSPQWQATHETRSYA-TYLSNAGYRTGYF 48


>AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA
           protein.
          Length = 1114

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 470 LYNHYAFTSNTQCSYTTDNISHKGHTYT*TYVCELNYESKIF 345
           ++NH  FT+N  CS      +H+  +Y  TY+    Y +  F
Sbjct: 111 VHNHMVFTNNDNCSSPQWQATHETRSYA-TYLSNAGYRTGYF 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,266,113
Number of Sequences: 53049
Number of extensions: 508138
Number of successful extensions: 904
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)