BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1702 (688 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_9909| Best HMM Match : AAA (HMM E-Value=0) 126 1e-29 SB_33442| Best HMM Match : AAA (HMM E-Value=0) 118 4e-27 SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21 SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21 SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16 SB_7424| Best HMM Match : AAA (HMM E-Value=0) 76 3e-14 SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13 SB_55690| Best HMM Match : AAA (HMM E-Value=0) 72 4e-13 SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12 SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 68 8e-12 SB_3115| Best HMM Match : AAA (HMM E-Value=0) 67 1e-11 SB_48561| Best HMM Match : AAA (HMM E-Value=0) 64 8e-11 SB_49367| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10 SB_45627| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10 SB_28977| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10 SB_19460| Best HMM Match : AAA (HMM E-Value=0) 62 3e-10 SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 9e-09 SB_732| Best HMM Match : AAA (HMM E-Value=0) 51 1e-06 SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06 SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 42 4e-04 SB_8213| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5 SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 29 2.7 SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15) 29 2.7 SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 29 3.5 SB_58098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5 SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 6.2 SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 28 8.1 SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 >SB_9909| Best HMM Match : AAA (HMM E-Value=0) Length = 400 Score = 126 bits (305), Expect = 1e-29 Identities = 55/104 (52%), Positives = 73/104 (70%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 180 S +V KY+GE AR++RE+F AR + CI+F DEIDAIGG RF +G D E+QRT++EL Sbjct: 152 SELVQKYVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 211 Query: 181 LNQMDGFDSLGQVKIIMATNRPDTLTPLC*GPEDWTGKSKYPCP 312 +NQ+DGFD G +K++MATNRPDTL P P K ++ P Sbjct: 212 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLP 255 Score = 37.9 bits (84), Expect = 0.008 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPN 314 DPAL+RPGRLDRK+E LP+ Sbjct: 237 DPALMRPGRLDRKVEFGLPD 256 >SB_33442| Best HMM Match : AAA (HMM E-Value=0) Length = 369 Score = 118 bits (284), Expect = 4e-27 Identities = 57/107 (53%), Positives = 72/107 (67%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 180 S V KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+EL Sbjct: 232 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLEL 291 Query: 181 LNQMDGFDSLGQVKIIMATNRPDTLTPLC*GPEDWTGKSKYPCPMNR 321 LNQMDGFD VK+IMATNR DTL P P K ++P P R Sbjct: 292 LNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 338 Score = 45.6 bits (103), Expect = 4e-05 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYE 386 DPALLRPGRLDRKIE PLP+ + + I + + E+D E Sbjct: 317 DPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLE 360 >SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 346 Score = 99 bits (238), Expect = 2e-21 Identities = 44/85 (51%), Positives = 62/85 (72%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 I + +IG+ A+L+R+ F A++ P IIF+DE+DAIG +RF + DRE+QRT++ELLN Sbjct: 163 IQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 222 Query: 187 QMDGFDSLGQVKIIMATNRPDTLTP 261 Q+DGF S +K+I ATNR D L P Sbjct: 223 QLDGFSSHHDIKVIAATNRVDILDP 247 Score = 88.6 bits (210), Expect = 4e-18 Identities = 40/83 (48%), Positives = 58/83 (69%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRN 434 DPALLR GRLDRKIE P P+++AR IL+IH+ + G+++++ + + +D FNGA L+ Sbjct: 246 DPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAMLKA 305 Query: 435 VCTEAGLFAIRAEREYIIQEDLM 503 VC EAG+ A+R E + ED M Sbjct: 306 VCVEAGMIALRREATEVCHEDYM 328 >SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 98.3 bits (234), Expect = 5e-21 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 14/118 (11%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYAR--------------DHQPCIIFMDEIDAIGGRRFSEG 138 S +V K+IGE AR++RE+F AR +H P IIFMDEID+IG R G Sbjct: 245 SELVQKFIGEGARMVRELFVMARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGG 304 Query: 139 TSADREIQRTLMELLNQMDGFDSLGQVKIIMATNRPDTLTPLC*GPEDWTGKSKYPCP 312 + D E+QRT++ELLNQ+DGF++ +K+IMATNR D L P K ++P P Sbjct: 305 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 362 Score = 40.7 bits (91), Expect(2) = 4e-08 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQ 320 D ALLRPGR+DRKIE P PNE+ Sbjct: 344 DSALLRPGRIDRKIEFPPPNEE 365 Score = 34.3 bits (75), Expect(2) = 4e-08 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 435 VCTEAGLFAIRAEREYIIQEDLMKASVK 518 VCTEAG++A+R R ++ QED A K Sbjct: 367 VCTEAGMYALRERRVHVTQEDFEMAVTK 394 >SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 177 Score = 83.4 bits (197), Expect = 2e-16 Identities = 37/44 (84%), Positives = 41/44 (93%) Frame = +3 Query: 378 DYEAVVKLSDTFNGADLRNVCTEAGLFAIRAEREYIIQEDLMKA 509 DYEAVVKLSD FNGADLRNVCTEAG+FAIR ER+Y+I+ED MKA Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEEDFMKA 158 Score = 41.1 bits (92), Expect = 8e-04 Identities = 17/21 (80%), Positives = 20/21 (95%) Frame = +2 Query: 503 EGVRKVADNKKLESKLDYKPV 565 + VRKV+DNKKLESKLDYKP+ Sbjct: 157 KAVRKVSDNKKLESKLDYKPI 177 >SB_7424| Best HMM Match : AAA (HMM E-Value=0) Length = 294 Score = 75.8 bits (178), Expect = 3e-14 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLME 177 S ++ ++G +R++F AR + PCIIF+DEIDA+G R G E + TL + Sbjct: 115 SEFLEMFVGVGPARVRDLFAQARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQ 174 Query: 178 LLNQMDGFDSLGQVKIIMATNRPDTLTPLC*GPEDWTGKSKYPCP 312 LL +MDGF S V ++ TNRPD L P P + + P P Sbjct: 175 LLVEMDGFSSSTNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAP 219 Score = 71.7 bits (168), Expect = 5e-13 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEA--VVKLSDTFNGADL 428 DPALLRPGR DR+I +P P+ + R I K+H PI K+ + + A + L+ F GAD+ Sbjct: 201 DPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKLARKMAALTPGFTGADI 260 Query: 429 RNVCTEAGLFAIRAEREYIIQEDLMKA 509 NVC EA L A R ++ ++ +A Sbjct: 261 ANVCNEAALIAARYLAPFVEEKHFEQA 287 >SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 802 Score = 72.9 bits (171), Expect = 2e-13 Identities = 37/83 (44%), Positives = 53/83 (63%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 + K++GES + +RE+F AR P I+F DE+DAI G+R S G S + R L +LL Sbjct: 607 LFSKWVGESEKAVREVFLKARATAPSIVFFDELDAIAGQRNSTGGSDVND--RVLTQLLT 664 Query: 187 QMDGFDSLGQVKIIMATNRPDTL 255 ++DG ++L V I ATNRPD + Sbjct: 665 ELDGVETLKDVIFIAATNRPDMI 687 Score = 63.7 bits (148), Expect = 1e-10 Identities = 30/71 (42%), Positives = 46/71 (64%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRN 434 D AL+RPGR+DR I +PLP R IL+IH + G +D E +V+ ++ ++GA++ Sbjct: 688 DKALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEIAA 747 Query: 435 VCTEAGLFAIR 467 VC EA L A++ Sbjct: 748 VCREAALAALQ 758 Score = 63.3 bits (147), Expect = 2e-10 Identities = 30/85 (35%), Positives = 50/85 (58%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 ++ +Y GE+ +RE+F A++ P I+F+DE+DA+ RR +R + TL+ L++ Sbjct: 326 VLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRRDKVQNEFERRVVATLLTLMD 385 Query: 187 QMDGFDSLGQVKIIMATNRPDTLTP 261 M + V ++ ATNRPD L P Sbjct: 386 GMHMKSTDTYVMVLAATNRPDALDP 410 Score = 52.4 bits (120), Expect = 3e-07 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEIL--KIHASPIAKHGEMDYEAVVKLSDTFNGADL 428 DPAL RPGR DR+IEI +P+ R +IL + P + H E D ++ + + + GADL Sbjct: 409 DPALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDE-DISSLAESAHGYVGADL 467 Query: 429 RNVCTEAGLFAIR 467 C EA L+A + Sbjct: 468 AAACKEASLYAFK 480 >SB_55690| Best HMM Match : AAA (HMM E-Value=0) Length = 1031 Score = 72.1 bits (169), Expect = 4e-13 Identities = 34/85 (40%), Positives = 52/85 (61%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 ++ KYIG S + +R+MF A+ +PCI+F DE D++ RR + T R + +LL Sbjct: 737 LLSKYIGASEQAVRDMFTRAQSAKPCILFFDEFDSLAPRRGHDSTGV---TDRVVNQLLT 793 Query: 187 QMDGFDSLGQVKIIMATNRPDTLTP 261 Q+DG + L V I+ AT+RPD + P Sbjct: 794 QLDGVEGLKGVYILAATSRPDLIDP 818 Score = 48.8 bits (111), Expect = 4e-06 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRN 434 DPALLRPGRLD+ + P+P++ R E+ + + + ++D +++ F GAD++ Sbjct: 817 DPALLRPGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHHFTGADIKA 876 Query: 435 VCTEAGLFAI 464 + + L AI Sbjct: 877 LLYNSQLEAI 886 >SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1086 Score = 70.5 bits (165), Expect = 1e-12 Identities = 33/85 (38%), Positives = 53/85 (62%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 +++ Y+G+S + +RE+F+ A+ PC+IF DE+D++ R G S + R + +LL Sbjct: 880 LINMYVGQSEQNVREVFSRAQAASPCVIFFDELDSLAPNRGRSGDSGG-VMDRVVAQLLA 938 Query: 187 QMDGFDSLGQVKIIMATNRPDTLTP 261 ++DG S V +I ATNRPD L P Sbjct: 939 ELDGLHSTCDVFVIGATNRPDLLDP 963 Score = 37.1 bits (82), Expect = 0.013 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNE-QARLEILKIHASPIAKHGEMDYEAVV-KLSDTFNGADL 428 DPALLRPGR D+ + + + + A+L +LK + E KL GADL Sbjct: 962 DPALLRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLNLTGADL 1021 Query: 429 RNVCTEAGLFAIR 467 + ++A L A+R Sbjct: 1022 YAMASDALLQAMR 1034 >SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 908 Score = 68.1 bits (159), Expect = 6e-12 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 3/84 (3%) Frame = +1 Query: 19 YIGESARLIREMFN---YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 189 + GES +R +FN YA PC++F+DE+DA+ +R G+S + E R + +LL Sbjct: 285 HAGESEENLRRVFNKARYASRFGPCVLFIDELDALCPKR---GSSGNEEENRIVAQLLTL 341 Query: 190 MDGFDSLGQVKIIMATNRPDTLTP 261 MDG +S G+V +I ATNRP+ L P Sbjct: 342 MDGLESRGRVIVIGATNRPNALDP 365 Score = 61.3 bits (142), Expect = 7e-10 Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHA--SPIAKHGEMDYEAVVKLSDTFNGADL 428 D ALLRPGR+D I +P P+ +ARLEIL++H SP+A ++D + + ++ ++GADL Sbjct: 712 DGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAP--DVDLSVIAEGTELYSGADL 769 Query: 429 RNVCTE 446 N+C E Sbjct: 770 ENLCRE 775 Score = 60.1 bits (139), Expect = 2e-09 Identities = 27/71 (38%), Positives = 45/71 (63%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRN 434 DPAL RPGR DR++ I +P+ RL+IL+ H PI ++D + +++ + GADL + Sbjct: 364 DPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGADLAS 423 Query: 435 VCTEAGLFAIR 467 +C +A A++ Sbjct: 424 LCQQAAFAALK 434 Score = 39.5 bits (88), Expect = 0.002 Identities = 22/64 (34%), Positives = 37/64 (57%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 + Y+G++ R +RE+ P ++F+DE+D++ G+R G + E R L LLN Sbjct: 554 LFSSYVGDAERTLRELVLQL----PLLLFLDELDSLAGKR---GNNLGME-TRLLATLLN 605 Query: 187 QMDG 198 +MDG Sbjct: 606 EMDG 609 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 67.7 bits (158), Expect = 8e-12 Identities = 32/80 (40%), Positives = 51/80 (63%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 +++ Y+GES R +R++F AR+ PC+IF DE+D++ RR G+S R + +LL Sbjct: 53 LLNMYVGESERAVRQVFQRARNSAPCVIFFDELDSLCPRR--SGSSESGSSVRVVNQLLT 110 Query: 187 QMDGFDSLGQVKIIMATNRP 246 +MDG + V I+ ATN+P Sbjct: 111 EMDGLQARKHVFIMGATNKP 130 >SB_3115| Best HMM Match : AAA (HMM E-Value=0) Length = 913 Score = 66.9 bits (156), Expect = 1e-11 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIG-GRRFSEGTSADREIQRTLME 177 S V+ + G + +R++F AR PCI+++DE+DAIG R+ S E + TL + Sbjct: 192 SDFVEMFAGVGSARVRDLFTRARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTLNQ 251 Query: 178 LLNQMDGFDSLGQVKIIMATNRPDTL 255 LL +MDG ++L V ++ +TNR D L Sbjct: 252 LLVEMDGMNTLDGVIMLASTNRADIL 277 Score = 60.1 bits (139), Expect = 2e-09 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDY--EAVVKLSDTFNGADL 428 D ALLRPGR DR I I LP R+EI ++H + +D + + +L+ +GAD+ Sbjct: 278 DNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELTPGHSGADI 337 Query: 429 RNVCTEAGLFAIRAEREYI 485 N+C EA L A R ++ + Sbjct: 338 ANICNEAALHAARLNKKNV 356 >SB_48561| Best HMM Match : AAA (HMM E-Value=0) Length = 2021 Score = 64.5 bits (150), Expect = 8e-11 Identities = 39/101 (38%), Positives = 54/101 (53%) Frame = +1 Query: 10 VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ 189 + K++GES R +R +F+ A +P IIF DEID + R S I TL+ L Sbjct: 960 LSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL--- 1016 Query: 190 MDGFDSLGQVKIIMATNRPDTLTPLC*GPEDWTGKSKYPCP 312 MDG DS G+V II ATNR D + P P + + ++ P Sbjct: 1017 MDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQFALP 1057 Score = 54.0 bits (124), Expect = 1e-07 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSD---TFNGAD 425 DPAL RPGR DR+ + LP+ AR IL IH + + +L+D + GAD Sbjct: 1039 DPALRRPGRFDREFQFALPDRDARRSILSIHTR--EWEPRLSQRFISELADYCVGYCGAD 1096 Query: 426 LRNVCTEAGLFAIR 467 ++ +CTEA L A+R Sbjct: 1097 IKALCTEAALCALR 1110 >SB_49367| Best HMM Match : AAA (HMM E-Value=0) Length = 976 Score = 63.3 bits (147), Expect = 2e-10 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 IV GES +RE+F A PCI+F+DEIDAI +R E S D E +R + +LL+ Sbjct: 746 IVSGVSGESEEKVRELFTSAVAQAPCILFLDEIDAITPKR--ENASKDME-RRIVSQLLS 802 Query: 187 QMDGFDSL--GQVKIIMATNRPDTLTP 261 MD ++ V +I ATNRPD+L P Sbjct: 803 CMDDLNNNPDAHVLVIGATNRPDSLDP 829 Score = 35.5 bits (78), Expect = 0.041 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEM 377 DPAL R GR DR+I + +P+E AR I+ + + M Sbjct: 828 DPALRRAGRFDREISMGIPDESARARIVGADLMALTREAAM 868 >SB_45627| Best HMM Match : AAA (HMM E-Value=0) Length = 628 Score = 63.3 bits (147), Expect = 2e-10 Identities = 30/85 (35%), Positives = 47/85 (55%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 ++ + GES +R++F+ AR PC++F DE+D+I R R + ++L Sbjct: 380 LLTMWFGESEANVRDVFDKARSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLT 439 Query: 187 QMDGFDSLGQVKIIMATNRPDTLTP 261 +MDG + V II ATNRPD + P Sbjct: 440 EMDGMNVKKNVFIIGATNRPDIIDP 464 Score = 48.8 bits (111), Expect = 4e-06 Identities = 31/81 (38%), Positives = 43/81 (53%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLRN 434 DPA+LRPGRLD+ I IPLP++ G++D + V K++ F+GADL Sbjct: 463 DPAILRPGRLDQLIYIPLPDD-----------------GDVDLDYVAKVTHGFSGADLTE 505 Query: 435 VCTEAGLFAIRAEREYIIQED 497 +C A AIR E I + Sbjct: 506 ICQRACKLAIREAIETDINRE 526 Score = 42.3 bits (95), Expect = 4e-04 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGAD 425 D AL R GR DR+++I +P+ RLEIL+IH + ++D E + + D + D Sbjct: 211 DVALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIREKMDLIDLED 267 Score = 31.1 bits (67), Expect = 0.87 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = +1 Query: 106 DAIGG--RRFSEGTSADREIQRTLM-ELLNQMDGFDSLGQVKIIMATNRPDTL 255 D IGG ++ ++ E++R ++ +LL MDG V ++ ATNRP+++ Sbjct: 158 DDIGGCRKQLAQIKETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSV 210 >SB_28977| Best HMM Match : AAA (HMM E-Value=0) Length = 442 Score = 62.9 bits (146), Expect = 2e-10 Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 180 S +V K++GES RL++++F AR+++P IIF+DE+D++ G R + + R I+ E Sbjct: 200 SDLVSKWLGESERLVKQLFELARENKPSIIFIDEVDSLCGSRSENESESARRIK---TEF 256 Query: 181 LNQMDGFD-SLGQVKIIMATNRPDTL 255 L QM G QV ++ ATN P TL Sbjct: 257 LVQMQGVGVDNDQVLVLGATNIPWTL 282 >SB_19460| Best HMM Match : AAA (HMM E-Value=0) Length = 340 Score = 62.5 bits (145), Expect = 3e-10 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 7/83 (8%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHA--SPIAKHGEMDYEAVVKLSDTFNGADL 428 D ALLRPGR+D I +P P+ +ARLEIL++H SP+A ++D + + ++ ++GADL Sbjct: 245 DGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAP--DVDLSVIAEGTELYSGADL 302 Query: 429 RNVC-----TEAGLFAIRAEREY 482 N+C T+ G ++RA E+ Sbjct: 303 ENLCRENLNTKLGSESVRASHEH 325 Score = 52.0 bits (119), Expect = 4e-07 Identities = 26/64 (40%), Positives = 40/64 (62%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 186 + Y+G++ R +RE+F AR P I+F+DE+D++ G+R G + E R L LLN Sbjct: 83 LFSSYVGDAERTLRELFLKARATAPAILFLDELDSLAGKR---GNNLGME-TRLLATLLN 138 Query: 187 QMDG 198 +MDG Sbjct: 139 EMDG 142 >SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 518 Score = 57.6 bits (133), Expect = 9e-09 Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Frame = +1 Query: 1 SAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 180 S + KY GES +L+R +F AR + P IF+DEID+I RR S+ S +R EL Sbjct: 317 STLTSKYRGESEKLVRILFEMARFYAPSTIFVDEIDSICSRRGSD--SEHEASRRVKSEL 374 Query: 181 LNQMDGFDSLG------QVKIIMATNRP 246 L QMDG QV ++ ATN P Sbjct: 375 LVQMDGVGGSSDDGETKQVMVLAATNFP 402 >SB_732| Best HMM Match : AAA (HMM E-Value=0) Length = 388 Score = 50.8 bits (116), Expect = 1e-06 Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Frame = +3 Query: 255 DPALLRPGRLDRKIEIPLPNEQARLEILKIHASPIAKH----GEMDYEAVVKLSDTFNGA 422 D ALLRPGRL+ ++EI LP+E+ R++ILKIH + + ++ ++D + + F GA Sbjct: 310 DDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDLAELATQTKNFTGA 369 Query: 423 DLRNVCTEA 449 ++ + A Sbjct: 370 EIEGLVRAA 378 Score = 45.6 bits (103), Expect = 4e-05 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%) Frame = +1 Query: 7 IVDKYIGESARLIREMFNYARDHQPC--------IIFMDEIDAIGGRRFSEGTSADREIQ 162 +++K++GES IR++F A + Q +I DE DA+ R+S T Sbjct: 219 VLNKFVGESEANIRKLFAEAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGGTGVQD 278 Query: 163 RTLMELLNQMDGFDSLGQVKIIMATNRPDTL 255 + +LL ++DG + L V +I TNR D + Sbjct: 279 SVVNQLLAKIDGVEQLNNVLLIGMTNRRDLI 309 >SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 49.2 bits (112), Expect = 3e-06 Identities = 18/38 (47%), Positives = 28/38 (73%) Frame = +1 Query: 13 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 126 + ++G A +R +F A++H PCI+F+DE+DAIGG R Sbjct: 202 EMFVGVGAARVRNLFAAAKEHAPCIVFVDELDAIGGSR 239 >SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 62 Score = 43.2 bits (97), Expect = 2e-04 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +3 Query: 279 RLDRKIEIPLPNEQARLEILKIHASPIAKHGEMDYEAVVKLSDTFNGADLR 431 R+DRKIE P+P+E+ + I IH + +++ E + D +GAD++ Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADIK 52 >SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) Length = 111 Score = 42.3 bits (95), Expect = 4e-04 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%) Frame = +1 Query: 22 IGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQR----TLMELLNQ 189 +GE +++R MF AR + P +IFMDEID++ +R A R I+ L+EL N Sbjct: 1 VGEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFLVQLVELAND 60 Query: 190 M 192 + Sbjct: 61 L 61 >SB_8213| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 244 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 58 NYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQV 219 +Y R H PC I+ D + AIG A R+++R+ L+ M D L + Sbjct: 59 DYMRTH-PCAIWCDHVSAIGNAMVIRHAVARRKLRRSFDRLIINMAVADLLDTI 111 >SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) Length = 264 Score = 29.5 bits (63), Expect = 2.7 Identities = 27/104 (25%), Positives = 35/104 (33%), Gaps = 2/104 (1%) Frame = +3 Query: 21 HR*IGPPHPGDVQLRAGPPTLHHIHGRDRCHR-WETFFRRHERRSRDPTYPDGVVEPNGW 197 HR + PP P + PP H HR E + + R ++P P P Sbjct: 96 HRPLEPPRPQEPHRPQEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEPHRPLEPTRPQES 155 Query: 198 FRLLGTGEDHHGHQQTR-HADPALLRPGRLDRKIEIPLPNEQAR 326 R L H+ H RP R +E P P E R Sbjct: 156 HRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPLEPPRPQEPHR 199 >SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15) Length = 630 Score = 29.5 bits (63), Expect = 2.7 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 37 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 150 R IRE F ++PC++F I + GR S+G AD Sbjct: 312 REIREEFGSEASYKPCLVF--RITVLRGRDISKGKVAD 347 >SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) Length = 420 Score = 29.1 bits (62), Expect = 3.5 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 246 RHADPALLRPGRLDRKIEI 302 + DPAL+RPGR+D K EI Sbjct: 335 KRLDPALIRPGRVDFKQEI 353 >SB_58098| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 170 Score = 29.1 bits (62), Expect = 3.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 162 LDLSIGARAFGKTSPTDGIDLVHEYDAGLVV 70 L L++ A+AF T TDG DLV + GL V Sbjct: 9 LALAVSAQAFAGTVSTDGADLVIKTKGGLEV 39 >SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 625 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/45 (24%), Positives = 23/45 (51%) Frame = -2 Query: 258 GQRVWSVGGHDDLHLSQGVETIHLVQQLHQGTLDLSIGARAFGKT 124 G+R+W+VGGH+ +E+ + + + + + +S G T Sbjct: 539 GERIWAVGGHNGTQYLGSMESYNPAKDVWEASAQMSTPRAGSGVT 583 >SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) Length = 662 Score = 27.9 bits (59), Expect = 8.1 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Frame = +3 Query: 219 EDHHGHQQTRHADPALL------RPGRLDRKIEIPLPNEQ 320 + H GHQQ +H +LL PG+L + ++ LP +Q Sbjct: 207 QQHPGHQQQQHPGQSLLGQQPQSGPGQLGQSLQQQLPGQQ 246 >SB_36239| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 414 Score = 27.9 bits (59), Expect = 8.1 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 19 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 123 Y+ E + + N HQP +MDE++ +GGR Sbjct: 146 YLQERKEQLNSVMNEIDPHQP---YMDELEVVGGR 177 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,997,980 Number of Sequences: 59808 Number of extensions: 484337 Number of successful extensions: 1320 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1305 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1781448916 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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