BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1702 (688 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 22 4.8 DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 22 4.8 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.3 >DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant 2 precursor protein. Length = 94 Score = 22.2 bits (45), Expect = 4.8 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -3 Query: 557 CSPVCSPAFCCRLLYGR 507 C +C+P CRL Y R Sbjct: 63 CIKICAPGCVCRLGYLR 79 >DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant 1 precursor protein. Length = 92 Score = 22.2 bits (45), Expect = 4.8 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -3 Query: 557 CSPVCSPAFCCRLLYGR 507 C +C+P CRL Y R Sbjct: 63 CIKICAPGCVCRLGYLR 79 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.4 bits (43), Expect = 8.3 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 Query: 470 GPDGEESCLRADV 432 G DG+ES RAD+ Sbjct: 202 GNDGDESSCRADI 214 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 194,495 Number of Sequences: 438 Number of extensions: 4142 Number of successful extensions: 10 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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