Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1701
         (705 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23C35 Cluster: Putative uncharacterized protein; n=1; ...    37   0.42 
UniRef50_UPI000023CE32 Cluster: hypothetical protein FG10632.1; ...    33   5.2  
UniRef50_UPI00006CF2E6 Cluster: hypothetical protein TTHERM_0005...    33   9.0  
UniRef50_Q8I367 Cluster: Putative uncharacterized protein PFI040...    33   9.0  
UniRef50_Q5DA81 Cluster: SJCHGC02538 protein; n=4; Schistosoma|R...    33   9.0  
UniRef50_Q2H8U4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q23C35 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 417

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -3

Query: 289 KQFLKRNIDGARNGQTLVDDHNRPLLAKYVVKITILLLFDINKNITLILNKHTSISFYR 113
           ++FL+ N+DG +N Q LV      L  +Y+  + I+   +INK I   +NK  +   Y+
Sbjct: 30  QKFLQSNLDGLKNLQLLVGQFQYLLNQQYIYFLMIIYKLEINKQINKQINKQINEQRYQ 88


>UniRef50_UPI000023CE32 Cluster: hypothetical protein FG10632.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG10632.1
            - Gibberella zeae PH-1
          Length = 1544

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 412  VRKTTTTYLLNTELANGQLFEPFEYSYYLFNQFFFINYHKSILNNFSL 555
            VR    TYL+NT   N +LF  +  +     Q  FI+ H+ +L  + L
Sbjct: 1034 VRHAAVTYLINTLTGNSELFALYREATQKIQQARFIDNHRRLLKGYFL 1081


>UniRef50_UPI00006CF2E6 Cluster: hypothetical protein
           TTHERM_00059510; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00059510 - Tetrahymena
           thermophila SB210
          Length = 1882

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 400 CDICVRKTTTTYLLNTELANGQLFEPFEYSYY 495
           C IC   T TT L N  L NG+ + P    YY
Sbjct: 719 CSICTSSTCTTCLNNYYLQNGKCYNPCPLGYY 750


>UniRef50_Q8I367 Cluster: Putative uncharacterized protein PFI0405w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0405w - Plasmodium falciparum
           (isolate 3D7)
          Length = 209

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
 Frame = -2

Query: 158 HYFNFKQTYKHLFLP-----LKNKKR-CKYIKNSNAFCYCFKELY 42
           ++F F Q YKHL L      LK KK+  K IK  + F +CFK LY
Sbjct: 134 NFFKFIQLYKHLILKTFLFLLKEKKKIAKEIK--DLFSFCFKVLY 176


>UniRef50_Q5DA81 Cluster: SJCHGC02538 protein; n=4; Schistosoma|Rep:
           SJCHGC02538 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 226

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +3

Query: 594 CWVQVVREEHKKKYRPNQ*LAILYINFEEK 683
           C+VQV+REEHKKK+   Q   I++ +F +K
Sbjct: 19  CFVQVIREEHKKKHPGEQ---IVFSDFSKK 45


>UniRef50_Q2H8U4 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 472

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 25/83 (30%), Positives = 41/83 (49%)
 Frame = +3

Query: 249 PFRAPSMFLFKNCLPKLHFSL*LPFYKTKSLISPVFFFSLSSCHM*RALGL*YLCTKNYH 428
           PF APS  +F + +  + F L        S ++ VF +S +   +  ALGL YL     +
Sbjct: 300 PFNAPSGAIFLHWIFTVIFILGCRTPDVYSFVTNVFIYSGNWIKLFLALGLVYL-----N 354

Query: 429 YIPTEHGTRKRATFRTVRI*LLF 497
           + P+E    +R TFR+  +  +F
Sbjct: 355 FAPSERWAEQRTTFRSSPLLTIF 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,055,380
Number of Sequences: 1657284
Number of extensions: 10576949
Number of successful extensions: 23654
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23645
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)