Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1701
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81882-1|CAA57465.1|  780|Homo sapiens vasopressin activated cal...    32   1.7  
BC063306-1|AAH63306.1|  780|Homo sapiens cullin 5 protein.             32   1.7  
AF327710-1|AAK07472.1|  780|Homo sapiens cullin 5 protein.             32   1.7  
AF017061-1|AAB70253.1|  781|Homo sapiens vasopressin-activated c...    32   1.7  
DQ247958-1|ABB52637.1|  665|Homo sapiens envelope polyprotein pr...    31   4.0  

>X81882-1|CAA57465.1|  780|Homo sapiens vasopressin activated
           calcium mobilizing receptor-like protein protein.
          Length = 780

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 400 CDICVRKTTTTYLLNTELANGQLFEPFEYSYYLFNQFFFINYHKSILNNFSLMHVLRD 573
           CD+ +RKT  +  L +E    +L E      Y+ N+  F+ YHK+ L    ++ +  D
Sbjct: 412 CDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISAD 469


>BC063306-1|AAH63306.1|  780|Homo sapiens cullin 5 protein.
          Length = 780

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 400 CDICVRKTTTTYLLNTELANGQLFEPFEYSYYLFNQFFFINYHKSILNNFSLMHVLRD 573
           CD+ +RKT  +  L +E    +L E      Y+ N+  F+ YHK+ L    ++ +  D
Sbjct: 412 CDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISAD 469


>AF327710-1|AAK07472.1|  780|Homo sapiens cullin 5 protein.
          Length = 780

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 400 CDICVRKTTTTYLLNTELANGQLFEPFEYSYYLFNQFFFINYHKSILNNFSLMHVLRD 573
           CD+ +RKT  +  L +E    +L E      Y+ N+  F+ YHK+ L    ++ +  D
Sbjct: 412 CDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISAD 469


>AF017061-1|AAB70253.1|  781|Homo sapiens vasopressin-activated
           calcium mobilizing putative receptor protein protein.
          Length = 781

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 400 CDICVRKTTTTYLLNTELANGQLFEPFEYSYYLFNQFFFINYHKSILNNFSLMHVLRD 573
           CD+ +RKT  +  L +E    +L E      Y+ N+  F+ YHK+ L    ++ +  D
Sbjct: 413 CDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISAD 470


>DQ247958-1|ABB52637.1|  665|Homo sapiens envelope polyprotein
           protein.
          Length = 665

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -1

Query: 333 LSYKREVKERSVTSANNS*KETLTELETVKRW*TITTGHC*RNTWSKLLFYYYSTLIKT 157
           LS      +  V+S+N+  K  + E++ +K+  TI TG+   N W + + Y   +L K+
Sbjct: 208 LSSSTPANQTIVSSSNDKSKVAIVEVKNLKQTLTIETGYKETNAWMEWIEYSVRSLNKS 266


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,576,674
Number of Sequences: 237096
Number of extensions: 1462985
Number of successful extensions: 1907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)