Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1701
(705 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.6
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 3.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 3.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 3.7
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 4.9
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 6.5
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 478 FEYSYYLFNQFFFINY 525
F +Y++F FFFI+Y
Sbjct: 470 FPVAYFMFLTFFFIHY 485
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 478 FEYSYYLFNQFFFINY 525
F +Y++F FFFI+Y
Sbjct: 456 FPVAYFMFLTFFFIHY 471
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 478 FEYSYYLFNQFFFINY 525
F +Y++F FFFI+Y
Sbjct: 490 FPVAYFMFLTFFFIHY 505
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 478 FEYSYYLFNQFFFINY 525
F +Y++F FFFI+Y
Sbjct: 439 FPVAYFMFLTFFFIHY 454
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 230 SQQATASEIRGQNYYFI 180
SQ EIRGQ YYF+
Sbjct: 248 SQYHMPKEIRGQLYYFL 264
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 230 SQQATASEIRGQNYYFI 180
SQ EIRGQ YYF+
Sbjct: 248 SQYHMPKEIRGQLYYFL 264
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 475 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 570
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 475 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 570
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 475 PFEYSYYLFNQFFFINYHKSILNNFSLMHVLR 570
P +Y + +FNQF + IL+ + +LR
Sbjct: 178 PLDYIFLIFNQFQDFSESFQILHAGRALRILR 209
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 682 FSSKLMYKIASHWLGRYFFLCSSL 611
++ + K+ + +G YFF+C S+
Sbjct: 438 YNGYIYQKMVADVVGDYFFICPSI 461
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 682 FSSKLMYKIASHWLGRYFFLCSSL 611
++ + K+ + +G YFF+C S+
Sbjct: 438 YNGYIYQKMVADVVGDYFFICPSI 461
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 329 DKISHFSGXXXXXXXLSYVTRTRAVIFVYE 418
DK+SHF LS + R+ V F Y+
Sbjct: 54 DKLSHFIESGITAIWLSPINRSPMVDFGYD 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,813
Number of Sequences: 438
Number of extensions: 3567
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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