Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1700X
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.19 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   0.76 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   9.4  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    20   9.4  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    20   9.4  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 154 NYYFIIIRH**KHYFNFKQTYKHLFLPLKNKKRCKYIKNSNAFCYCF 14
           NYY I++       F  ++T+  L   LKN + C  IK +  +CY +
Sbjct: 79  NYYVIVVTT-----FYKRRTWTRL---LKNLESCAKIKKTKRYCYYY 117


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 181 PVVIVYQRLTVYELRQCFFLRIV 249
           PV + Y  + V ++  CFF+R++
Sbjct: 175 PVYVSYLLIFVQQIPFCFFVRVI 197


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +3

Query: 165 ISLAVACCDRLPAFDR-LRAPSMFLFKNC 248
           + L V    RLP FD+ LR   + L K C
Sbjct: 366 VQLIVEFAKRLPGFDKLLREDQIALLKAC 394


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 181  ATASEIRGQNYYFIIIR 131
            AT  E+R + Y+F +++
Sbjct: 1018 ATIQEVRAKIYFFYLVK 1034


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 161 WSKLLFYYYSTLI 123
           WS LLF  YS+L+
Sbjct: 280 WSFLLFTLYSSLL 292


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 161 WSKLLFYYYSTLI 123
           WS LLF  YS+L+
Sbjct: 206 WSFLLFTLYSSLL 218


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 181 ATASEIRGQNYYFIIIR 131
           AT  E+R + Y+F +++
Sbjct: 299 ATIQEVRAKIYFFYLVK 315


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 446 IFERFEKLPVCEF 408
           IFER   LPV EF
Sbjct: 247 IFERLSILPVDEF 259


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 123 KNITLILNKHTSISFYRSKIKRDASI*KIQTRSVIALK 10
           K ITL +    +I   ++KI+    I   Q RS+ A K
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGK 428


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 123 KNITLILNKHTSISFYRSKIKRDASI*KIQTRSVIALK 10
           K ITL +    +I   ++KI+    I   Q RS+ A K
Sbjct: 59  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,547
Number of Sequences: 336
Number of extensions: 1863
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)