Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1699
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    65   2e-09
UniRef50_A7SZ23 Cluster: Predicted protein; n=1; Nematostella ve...    35   2.6  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 64.9 bits (151), Expect = 2e-09
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
 Frame = -2

Query: 310 HPNCNFCKFNFYYMTS*PGDFVAPQSINKRPKLLYKIN-KRNPSV-------GGHQNCYF 155
           +P+    +  F  + + P DFV PQSINKRPK LYKIN K+   +          QNCYF
Sbjct: 8   YPHTELSQILFMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYF 67

Query: 154 YLIPKIFIFI 125
           YLIP+IFIFI
Sbjct: 68  YLIPRIFIFI 77


>UniRef50_A7SZ23 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 121

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -3

Query: 615 KPAKV-GPYCLYL*QSRHAFHFEGWNNSYVFLYFYCLMGGRAHGPLDAKCLP 463
           KP+ V G YC+     R    FEGW   ++     CL GG   GP    CLP
Sbjct: 58  KPSCVNGGYCVGSNTCRCLRGFEGWRCEHMKCMVSCLNGGSCVGPYLCNCLP 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,416,728
Number of Sequences: 1657284
Number of extensions: 17504936
Number of successful extensions: 33777
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33771
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)