Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1699
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 7   STVKEY---HLSSIFFFYTDRRPIWVILVLNYLWKSREGLKG 123
           S VK Y   H  ++   YT  +P++ I  L  L   R G KG
Sbjct: 5   SKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNTLRIGRKG 46


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 7   STVKEY---HLSSIFFFYTDRRPIWVILVLNYLWKSREGLKG 123
           S VK Y   H  ++   YT  +P++ I  L  L   R G KG
Sbjct: 5   SKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNTLRIGRKG 46


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +3

Query: 540 CSIPQNGTRVCFVTDIGNMDQPLQAYFMPPVNADWLSQYADTIFG 674
           C    +GTR+    +  N+ Q +   F   VN D +  Y +   G
Sbjct: 165 CFCSADGTRIPGQLEPANVPQMITLTFNGAVNVDNIDLYEEIFNG 209


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 698 YDTHHDPTTLP 730
           YD HH+P   P
Sbjct: 392 YDMHHNPNVFP 402


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 698 YDTHHDPTTLP 730
           YD HH+P   P
Sbjct: 392 YDMHHNPNVFP 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,333
Number of Sequences: 336
Number of extensions: 5033
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)