Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1693X
         (437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060716-1|AAL28264.1|  309|Drosophila melanogaster GH15921p pro...    30   1.6  
AE014134-2312|AAF53272.2|  309|Drosophila melanogaster CG16820-P...    30   1.6  
AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    29   2.1  
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    29   2.1  
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    29   2.1  
AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA...    27   8.4  
AE014134-1301|AAF52533.1|  773|Drosophila melanogaster CG13792-P...    27   8.4  

>AY060716-1|AAL28264.1|  309|Drosophila melanogaster GH15921p
           protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 158 GGRRLAPAGPFTVSVGNVK 102
           GG RL P GPF +++ N+K
Sbjct: 195 GGLRLVPKGPFNITIDNIK 213


>AE014134-2312|AAF53272.2|  309|Drosophila melanogaster CG16820-PA
           protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 158 GGRRLAPAGPFTVSVGNVK 102
           GG RL P GPF +++ N+K
Sbjct: 195 GGLRLVPKGPFNITIDNIK 213


>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 251 KSSSRHGDRTHHAKSHSR 304
           K SSRHG R+HH+ S S+
Sbjct: 735 KRSSRHGHRSHHSSSRSK 752


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 251 KSSSRHGDRTHHAKSHSR 304
           K SSRHG R+HH+ S S+
Sbjct: 735 KRSSRHGHRSHHSSSRSK 752


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 251 KSSSRHGDRTHHAKSHSR 304
           K SSRHG R+HH+ S S+
Sbjct: 754 KRSSRHGHRSHHSSSRSK 771


>AE014298-2749|AAF48868.1|  686|Drosophila melanogaster CG6632-PA
           protein.
          Length = 686

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +2

Query: 254 SSSRHGDRTH---HAKSHSRDLGNSPLTANATGNTSRDLEDSPHKKILSGLMAP 406
           S S HG   H   H   H    G+   + +  G++S   E    KK+ + L  P
Sbjct: 459 SQSHHGGHGHGHGHGHGHGHGHGHHSSSGHGGGHSSHHQEKKQKKKLTTALTLP 512


>AE014134-1301|AAF52533.1|  773|Drosophila melanogaster CG13792-PA
           protein.
          Length = 773

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +2

Query: 260 SRHGDRTHHAKSHSRDLGNSPLTANATGNTSRDLEDSPHKKILSG 394
           S H    ++   +S   G+S  +++++ +T+  +++SP +  LSG
Sbjct: 681 SIHATNQNNTAQNSTTKGSSTTSSDSSSSTTSSVDESPSRHTLSG 725


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,864,717
Number of Sequences: 53049
Number of extensions: 326162
Number of successful extensions: 897
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)