Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1688
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.0  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    25   2.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.5  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   4.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 103 LEFSLNTHTNMPSDMIQHRKH 41
           LE SLN  TN+P ++    KH
Sbjct: 263 LELSLNRLTNLPPELFSEAKH 283


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 528 LIFSMLTGGSQGYTTLFHFLNNNWAVLKEKFASKTNLWDSLISAATGQFTTQEGLDLVSN 707
           ++  +L  GSQ   T+  F  N+W  +++++ S   L D++IS    +F     L  +  
Sbjct: 761 MLVVVLIYGSQKEVTVLQFTGNDW--VEKEYISDFPL-DAVISVGK-KFVVLCDLKTLRV 816

Query: 708 LYVAHQGEFGSAE 746
           L + H+G     E
Sbjct: 817 LTINHKGNLNDTE 829


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 385 FPPSRKQSERTYLLKT 432
           FPPS+KQSE  Y  +T
Sbjct: 23  FPPSKKQSELPYCCQT 38


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 606 KLPNCCSRNGTGSCTPV 556
           K P  CS NG+ S TP+
Sbjct: 233 KSPRLCSSNGSSSATPL 249


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 606 KLPNCCSRNGTGSCTPV 556
           K P  CS NG+ S TP+
Sbjct: 233 KSPRLCSSNGSSSATPL 249


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +2

Query: 227 YKP-CVKDAQDTTLNGC 274
           YKP C +DA DT + GC
Sbjct: 453 YKPYCQRDAVDTFVRGC 469


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,185
Number of Sequences: 2352
Number of extensions: 19552
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)