Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1687
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   7.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 327 NNEGALLRVLVVDPQGLVTIYSPDENWVAHDANTSNHDEH 446
           N++   LR L+  PQ   T  +  EN+  +D N  + +E+
Sbjct: 120 NDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNFSAEEN 159


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 327 NNEGALLRVLVVDPQGLVTIYSPDENWVAHDANTSNHDEH 446
           N++   LR L+  PQ   T  +  EN+  +D N  + +E+
Sbjct: 120 NDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNFSAEEN 159


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +1

Query: 286 KSYKRKHSLHGYLQIMKVLFSGFLW 360
           KS++   ++     ++ +LF  +LW
Sbjct: 111 KSFRMNFAIFNLYMVLLLLFDAYLW 135


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 327 NNEGALLRVLVVDPQGLVTIYSPDENWVAHDANTSNHDEH 446
           +++   LR L+  PQ   T  +  EN+  +D N  + +E+
Sbjct: 120 DDDSPALRALLTRPQAKKTPPNQYENFQQYDNNNFSAEEN 159


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +3

Query: 363 DPQGLVTIYSPDENWVAHDANTSNHDEHKWTL 458
           DP  LV  ++ D  ++ H+   +  D   W +
Sbjct: 318 DPSWLVNAFNVDPLYLKHEQQGAAPDYRHWQI 349


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 574 FKPPTINFPCNKINATCYSWLPAI 503
           FKPP  +   ++++  C++  P+I
Sbjct: 355 FKPPLFHMGGDEVHLGCWNSTPSI 378


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 190  ELHLHASPLRLSCVSRVVFAQLLQLPR 110
            E H+     ++ CV R   AQ  QLP+
Sbjct: 1243 EEHMCDWKYKVKCVGRKQLAQKYQLPK 1269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,410
Number of Sequences: 336
Number of extensions: 4104
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)