Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1687
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = -3

Query: 607 GNSSRVSEKITFKPPTI--NFPCNKINATCYSWLPAISPITKTFW*MRDISFKVHLCSSW 434
           GN+  +    T++P  I  NF    +     +    + P    +  +    F +HLC  W
Sbjct: 53  GNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLW 112

Query: 433 LDVFASCAT 407
           L     C T
Sbjct: 113 LTCDVLCCT 121


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = -3

Query: 607 GNSSRVSEKITFKPPTI--NFPCNKINATCYSWLPAISPITKTFW*MRDISFKVHLCSSW 434
           GN+  +    T++P  I  NF    +     +    + P    +  +    F +HLC  W
Sbjct: 53  GNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLW 112

Query: 433 LDVFASCAT 407
           L     C T
Sbjct: 113 LTCDVLCCT 121


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
 Frame = -3

Query: 607 GNSSRVSEKITFKPPTI--NFPCNKINATCYSWLPAISPITKTFW*MRDISFKVHLCSSW 434
           GN+  +    T++P  I  NF    +     +    + P    +  +    F +HLC  W
Sbjct: 53  GNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLW 112

Query: 433 LDVFASCAT 407
           L     C T
Sbjct: 113 LTCDVLCCT 121


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 49  GAVCEEKDICFPGCKIACEFH 111
           G   E +++  PGC++ C  +
Sbjct: 302 GIPSEARELQLPGCEVLCPLY 322


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +1

Query: 49  GAVCEEKDICFPGCKIACEFH 111
           G   E +++  PGC++ C  +
Sbjct: 317 GIPSEARELQLPGCEVLCPLY 337


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 8   GKTVNFSSPTTKYGEP 55
           G TVN +S T   GEP
Sbjct: 535 GNTVNLTSRTETTGEP 550


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 73  IC-FPGCKIACEFHAEAARAGQTQPVIHTKGEGVMRV 180
           +C +PGC++ CE +    +   T+  +  +     RV
Sbjct: 282 VCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARV 318


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 8   GKTVNFSSPTTKYGEP 55
           G TVN +S T   GEP
Sbjct: 535 GNTVNLTSRTETTGEP 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,511
Number of Sequences: 438
Number of extensions: 4946
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)