Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1685
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075269-1|AAL68136.1| 275|Drosophila melanogaster AT29209p pro... 37 0.030
AE013599-3410|AAF46859.2| 270|Drosophila melanogaster CG3927-PA... 37 0.030
AE013599-3276|AAF46762.2| 319|Drosophila melanogaster CG4021-PA... 36 0.053
U87150-1|AAB47553.1| 404|Drosophila melanogaster muscle-specifi... 34 0.16
U85651-1|AAB51251.1| 405|Drosophila melanogaster WHO protein. 34 0.16
U72331-1|AAB17350.1| 404|Drosophila melanogaster putative RNA-b... 34 0.16
AY069862-1|AAL40007.1| 406|Drosophila melanogaster SD10595p pro... 34 0.16
AF003106-1|AAB60946.1| 407|Drosophila melanogaster KH-domain pr... 34 0.16
AE014297-3094|AAN13901.1| 375|Drosophila melanogaster CG10293-P... 34 0.16
AE014297-3093|AAZ52538.1| 380|Drosophila melanogaster CG10293-P... 34 0.16
AE014297-3092|AAF55952.1| 405|Drosophila melanogaster CG10293-P... 34 0.16
AY058724-1|AAL13953.1| 320|Drosophila melanogaster LD46502p pro... 33 0.37
AF096273-1|AAC72376.1| 317|Drosophila melanogaster KEP1 protein. 33 0.37
AF038583-1|AAB97003.1| 317|Drosophila melanogaster QKR58E-3 pro... 33 0.37
AE013599-3392|AAF46842.2| 320|Drosophila melanogaster CG3584-PA... 33 0.37
AE013599-3431|AAF46876.2| 340|Drosophila melanogaster CG3875-PA... 32 0.65
AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p pro... 29 8.0
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 29 8.0
AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA... 29 8.0
>AY075269-1|AAL68136.1| 275|Drosophila melanogaster AT29209p
protein.
Length = 275
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
++ KV++ ++ P F+ G+ILGP G +L ++ ET V+KG
Sbjct: 86 IIQKVFVPVNKFPK-FNFTGKILGPKGNSLRRLQEETHCKIVIKG 129
>AE013599-3410|AAF46859.2| 270|Drosophila melanogaster CG3927-PA
protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
++ KV++ ++ P F+ G+ILGP G +L ++ ET V+KG
Sbjct: 81 IIQKVFVPVNKFPK-FNFTGKILGPKGNSLRRLQEETHCKIVIKG 124
>AE013599-3276|AAF46762.2| 319|Drosophila melanogaster CG4021-PA
protein.
Length = 319
Score = 35.9 bits (79), Expect = 0.053
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
++ KV++ ++ P F+ G+ILGP G +L ++ ET LKG
Sbjct: 84 IIQKVFVPVNQYPK-FNFAGKILGPKGNSLRRLQEETQCKIALKG 127
>U87150-1|AAB47553.1| 404|Drosophila melanogaster muscle-specific
protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>U85651-1|AAB51251.1| 405|Drosophila melanogaster WHO protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>U72331-1|AAB17350.1| 404|Drosophila melanogaster putative
RNA-binding protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>AY069862-1|AAL40007.1| 406|Drosophila melanogaster SD10595p
protein.
Length = 406
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 141 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 182
>AF003106-1|AAB60946.1| 407|Drosophila melanogaster KH-domain
protein KH93F protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 141 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 182
>AE014297-3094|AAN13901.1| 375|Drosophila melanogaster CG10293-PB,
isoform B protein.
Length = 375
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>AE014297-3093|AAZ52538.1| 380|Drosophila melanogaster CG10293-PC,
isoform C protein.
Length = 380
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>AE014297-3092|AAF55952.1| 405|Drosophila melanogaster CG10293-PA,
isoform A protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+KVY+ + P F+ GRILGP G + + ETG +++G
Sbjct: 139 EKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRG 180
>AY058724-1|AAL13953.1| 320|Drosophila melanogaster LD46502p
protein.
Length = 320
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+ KV++ + P F+ G+ILGP G +L ++ ET +KG
Sbjct: 83 ITQKVFVPVKQYPK-FNFTGKILGPKGNSLRRLQEETQCKIAIKG 126
>AF096273-1|AAC72376.1| 317|Drosophila melanogaster KEP1 protein.
Length = 317
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+ KV++ + P F+ G+ILGP G +L ++ ET +KG
Sbjct: 80 ITQKVFVPVKQYPK-FNFTGKILGPKGNSLRRLQEETQCKIAIKG 123
>AF038583-1|AAB97003.1| 317|Drosophila melanogaster QKR58E-3
protein.
Length = 317
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+ KV++ + P F+ G+ILGP G +L ++ ET +KG
Sbjct: 80 ITQKVFVPVKQYPK-FNFTGKILGPKGNSLRRLQEETQCKIAIKG 123
>AE013599-3392|AAF46842.2| 320|Drosophila melanogaster CG3584-PA
protein.
Length = 320
Score = 33.1 bits (72), Expect = 0.37
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+ KV++ + P F+ G+ILGP G +L ++ ET +KG
Sbjct: 83 ITQKVFVPVKQYPK-FNFTGKILGPKGNSLRRLQEETQCKIAIKG 126
>AE013599-3431|AAF46876.2| 340|Drosophila melanogaster CG3875-PA
protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.65
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 77 LVDKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
+ KV++ ++ P F+ +ILGP G ++ ++ ET V+KG
Sbjct: 86 ITQKVFVPVNKFPK-FNFARKILGPKGNSVRRLKEETNCKIVIKG 129
>AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p
protein.
Length = 417
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
DKV I + P + G ++GP G L+ + +TG +++G
Sbjct: 23 DKVLIPQEQHPD-INFVGLLIGPRGNTLKAMEKDTGAKIIIRG 64
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
DKV I + P + G ++GP G L+ + +TG +++G
Sbjct: 393 DKVLIPQEQHPD-INFVGLLIGPRGNTLKAMEKDTGAKIIIRG 434
>AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA
protein.
Length = 787
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 83 DKVYIGLDNAPAAFDIKGRILGPNGTNLEYIRSETGVVAVLKG 211
DKV I + P + G ++GP G L+ + +TG +++G
Sbjct: 393 DKVLIPQEQHPD-INFVGLLIGPRGNTLKAMEKDTGAKIIIRG 434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,483,583
Number of Sequences: 53049
Number of extensions: 560435
Number of successful extensions: 1893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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