Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1684X
(489 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 142 2e-35
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 110 1e-25
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 66 4e-12
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 62 6e-11
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 60 1e-10
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 59 4e-10
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 57 1e-09
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 55 5e-09
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 54 2e-08
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 47 1e-06
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 46 3e-06
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 44 9e-06
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 42 4e-05
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 29 0.38
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 26 3.5
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 4.6
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 25 4.6
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 6.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.1
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 8.1
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 25 8.1
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 142 bits (345), Expect = 2e-35
Identities = 63/90 (70%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +1
Query: 223 PRHTI-RGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 399
P T+ G F A L+FP++YPL PP+MKF TEIWHPN+ NG+VCISILH PGDDK+GY
Sbjct: 45 PEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGY 104
Query: 400 EKASERWLPVHTVETILISVISMLAGPNDE 489
E A ERWLPVH+ ETILISVISML+ PNDE
Sbjct: 105 EDAGERWLPVHSPETILISVISMLSSPNDE 134
Score = 73.3 bits (172), Expect = 2e-14
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
E+ KNP +GFS GL+DD I++WEV+IIGP DTLYEGGFF FP++
Sbjct: 16 EIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQD 64
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 110 bits (265), Expect = 1e-25
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = +1
Query: 256 AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHT 435
A L FP +YPL PP +KF E +HPN+ K+G VCISILH PGDD YE +SERW PV +
Sbjct: 57 ATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQS 116
Query: 436 VETILISVISMLAGPNDE 489
VE IL+SV+SMLA PNDE
Sbjct: 117 VEKILLSVMSMLAEPNDE 134
Score = 41.5 bits (93), Expect = 7e-05
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
EL +N +G +AG +++D + W+ LI GP T +EGG + FP
Sbjct: 16 ELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFP 62
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 65.7 bits (153), Expect = 4e-12
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T I+HPNI+ NG +C+ IL ++W P T+
Sbjct: 54 IHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 41.5 bits (93), Expect = 7e-05
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
A+L K+P SAG + D D++ W+ I+GP D+ Y GG F
Sbjct: 11 ADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVF 50
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 61.7 bits (143), Expect = 6e-11
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP YP PP + F + +WHPN+D +G++C+ IL ++W V+ V+
Sbjct: 82 MSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDIL-------------KDKWSAVYNVQ 128
Query: 442 TILISVISMLAGPND 486
TIL+S+ S+L PN+
Sbjct: 129 TILLSLQSLLGEPNN 143
Score = 33.5 bits (73), Expect = 0.017
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 158 GFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
G SA D+++ W I GP DT YEG FK FP N
Sbjct: 47 GISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 60.5 bits (140), Expect = 1e-10
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P+ + G + FP+EYP RPP+ +F ++HPN+ +G VC+SIL+E
Sbjct: 49 PKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNE--------- 99
Query: 403 KASERWLPVHTVETILISVISMLAGPN 483
E W P T++ IL+ + +L PN
Sbjct: 100 --EEGWKPAITIKQILLGIQDLLDDPN 124
Score = 30.3 bits (65), Expect = 0.16
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 188 DIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
D+ W+V I G P T +EGG +K FP
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFP 65
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 58.8 bits (136), Expect = 4e-10
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L P EYP+ PP ++F+T+I+HPN+DK G +C+S L + W P +
Sbjct: 55 LFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIR 101
Query: 442 TILISVISMLAGPNDE 489
T+L+S+ +++ PN +
Sbjct: 102 TVLLSIQALMGAPNPD 117
Score = 29.1 bits (62), Expect = 0.38
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IF 271
L ++P G A +DN Y +++ + GP + YEGG F H+ +F
Sbjct: 14 LTRDPPPGIVAAPTEDNLRY-FKITMEGPQQSAYEGGKF-HLELF 56
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 57.2 bits (132), Expect = 1e-09
Identities = 28/75 (37%), Positives = 44/75 (58%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L+F ++YP +PP +KFV+ ++HPN+ NG++C+ IL RW P + V
Sbjct: 57 LSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVA 103
Query: 442 TILISVISMLAGPND 486
IL S+ S+L PN+
Sbjct: 104 AILTSIQSLLNDPNN 118
Score = 37.9 bits (84), Expect = 8e-04
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
+ ++P G SA + DN + W +IIGP DT +E G FK
Sbjct: 16 MQQDPPAGVSASPVSDN-VMLWNAVIIGPADTPFEDGTFK 54
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 55.2 bits (127), Expect = 5e-09
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 241 GRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASER 417
G + + P +YP RPP+M F T+I+HPN+ + G +C+ IL ++
Sbjct: 50 GGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDIL-------------KDQ 96
Query: 418 WLPVHTVETILISVISMLAGP 480
W PV+T+++ LIS+ S+L P
Sbjct: 97 WSPVYTMKSALISLQSLLCTP 117
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
A++ ++ G I+D DI + + GP T YEGG+F
Sbjct: 14 ADVQQDKQAGIQVWTIND-DISHLKGMFRGPEGTPYEGGYF 53
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 53.6 bits (123), Expect = 2e-08
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 375
L FP +YP +PP ++F T I+HPN D G+VC++IL +
Sbjct: 60 LKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQ 97
Score = 38.7 bits (86), Expect = 5e-04
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
++L ++P+ L+DDN ++ W +GP D++Y GG F FP
Sbjct: 17 SDLREHPIPDIRVNLVDDN-LFHWACTALGPSDSVYAGGKFHFSLKFP 63
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 47.2 bits (107), Expect = 1e-06
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 259 HLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 426
H+ P EYP + P + FV I+HPNID+ +G VC+ ++++ + E +LP
Sbjct: 52 HVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLP 108
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 46.0 bits (104), Expect = 3e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 280 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 459
YP PP++K + +I+HPNID G+VC++IL + W PV + +IL+ +
Sbjct: 80 YPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQD-------------WNPVLNLNSILVGL 126
Query: 460 ISMLAGPNDE 489
+ PN E
Sbjct: 127 QFLFLSPNAE 136
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 44.4 bits (100), Expect = 9e-06
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
L KNPVE A +N I +W +I GPPDT YEGG + IFP
Sbjct: 17 LQKNPVELVDAKPATEN-ILEWHYIITGPPDTPYEGGQYHGTLIFP 61
Score = 28.3 bits (60), Expect = 0.66
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L FP +YP +PP ++ +T N +C+S + + W P V
Sbjct: 58 LIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF----------SDFHPKSWNPSWMVS 105
Query: 442 TILISVISML 471
TIL+ ++S +
Sbjct: 106 TILVGLVSFM 115
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 42.3 bits (95), Expect = 4e-05
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 280 YPLRPPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKA 408
YP+ PP + F T+I HPNI NG+VC+ IL W + A
Sbjct: 64 YPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSA 107
Score = 31.5 bits (68), Expect = 0.071
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 176 IDDNDIYKWEVLIIGPPDTLYEGG 247
+ D D++ W+ +I GP +T YEGG
Sbjct: 29 VTDVDMFHWKAVIEGPTETPYEGG 52
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 29.1 bits (62), Expect = 0.38
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 485 SFGPASIEMTLISIVSTVCTGNH 417
SF AS+ TLI+I ++ CTGN+
Sbjct: 63 SFSNASVYTTLITITNSQCTGNY 85
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 292 VSKDIPWENLNVLKETSLV*CVWGTNNEDFP 200
+SK I + +NV+K+ + V +NNE+ P
Sbjct: 432 ISKSIDYPEMNVIKDKNKDSTVRASNNENIP 462
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 4.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 198 NGKSSLLVPQTHYTREVSLSTFKFSQGISFE 290
+ K+SLL H +++S+S+ K GIS E
Sbjct: 688 DSKNSLLDALEHSLQDISMSSQKLGNGISSE 718
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 105 DCGSDINYNCEIYPED 58
DCGS+ Y CEI E+
Sbjct: 65 DCGSNCGYECEITAEN 80
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.0 bits (52), Expect = 6.1
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 339 INIWMPYFSHKFHPGW 292
+N+W+ ++ FHP W
Sbjct: 306 VNLWIAHYWKDFHPRW 321
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.6 bits (51), Expect = 8.1
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -1
Query: 240 SYSVSGGPIMRTSHLYISLSSIKPAEKPST---GFLFSSANCFFNKSEDCGSDINYNCEI 70
++S++ ++ + YI + IK E L+ F+K++ INY+ E+
Sbjct: 2975 THSLANSFVLLANEFYIHNAKIKQKELEEIEEKNRLYRQREFNFDKNDYLKVFINYDDEV 3034
Query: 69 YPEDTKQMIFRQK 31
PE +++ +K
Sbjct: 3035 EPEVEPEVVIERK 3047
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 143 KNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYE 241
KN GF +G+++D+ I ++ +G P Y+
Sbjct: 196 KNLRGGFGSGVLNDDGIEDQDIYDLGAPKMRYD 228
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 24.6 bits (51), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 201 HLYISLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPE 61
H I+L+ + E+ + F S + F E+CGS++ Y I+PE
Sbjct: 188 HNLIALNMPQSDEEAVKHYKFISDHLF---EEECGSNVTYLKCIWPE 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,232
Number of Sequences: 5004
Number of extensions: 44192
Number of successful extensions: 156
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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