Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1684X
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 146 8e-36
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 112 1e-25
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 107 4e-24
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 65 3e-11
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 65 3e-11
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 62 2e-10
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 56 1e-08
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 56 1e-08
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 54 6e-08
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 50 1e-06
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 47 8e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 47 8e-06
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 42 3e-04
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 41 4e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 41 6e-04
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 40 0.001
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.004
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 37 0.007
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 37 0.009
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 36 0.012
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 36 0.016
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 0.78
AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical ... 29 1.8
Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 3.2
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 28 4.2
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 5.5
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine r... 27 7.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 146 bits (354), Expect = 8e-36
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P G F A L+FP++YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE
Sbjct: 44 PDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYE 103
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
+ ERWLPVHTVETIL+SVISML PN E
Sbjct: 104 RPEERWLPVHTVETILLSVISMLTDPNFE 132
Score = 90.2 bits (214), Expect = 7e-19
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
A++ + PV+GFSAGL+DDNDIYKWEVL+IGPPDTLYEGGFFK I FPR+
Sbjct: 13 ADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 112 bits (270), Expect = 1e-25
Identities = 48/78 (61%), Positives = 61/78 (78%)
Frame = +1
Query: 256 AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHT 435
A + FP++YPL PP+M+F I+HPNI +G VCISILH PGDD GYE ++ERW PV +
Sbjct: 56 ARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQS 115
Query: 436 VETILISVISMLAGPNDE 489
+E IL+SV+SMLA PNDE
Sbjct: 116 IEKILLSVVSMLAEPNDE 133
Score = 43.6 bits (98), Expect = 8e-05
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
EL P EG A ID+++ ++WE LI GP +T + G F FP++
Sbjct: 15 ELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQD 63
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 107 bits (257), Expect = 4e-24
Identities = 47/90 (52%), Positives = 59/90 (65%)
Frame = +1
Query: 214 YWSPRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 393
Y P+ +G + A + FP YP PP MKF T++WHPN+ +NGD+CISILH P DD
Sbjct: 47 YGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQ 106
Query: 394 GYEKASERWLPVHTVETILISVISMLAGPN 483
E A ERW P +V TIL+SVIS+L PN
Sbjct: 107 SGELACERWNPTQSVRTILLSVISLLNEPN 136
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
L PVEGF+ + +DN ++ W V I GPP TLY+GG+FK FP N
Sbjct: 22 LQSQPVEGFTIDVNEDN-LFVWTVGIYGPPKTLYQGGYFKASIRFPSN 68
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P +G ++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
+W P T+ +L+S+ S+L PN +
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPNPD 116
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L ++P SAG + D D++ W+ I+GPP++ Y+GG F
Sbjct: 12 DLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVF 50
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P +G ++FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
+W P T+ +L+S+ S+L PN +
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPNPD 116
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L ++P SAG + D D++ W+ I+GPP++ Y+GG F
Sbjct: 12 DLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVF 50
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P +
Sbjct: 57 LFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIR 103
Query: 442 TILISVISMLAGPNDE 489
T+L+S+ ++L+ PN E
Sbjct: 104 TVLLSIQALLSAPNPE 119
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVA 103
Query: 442 TILISVISMLAGPN 483
IL S+ S+L PN
Sbjct: 104 AILTSIQSLLDEPN 117
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
+L ++P G S +DN I WE +I GP +T +E G FK
Sbjct: 15 KLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFK 54
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVA 103
Query: 442 TILISVISMLAGPN 483
IL S+ S+L PN
Sbjct: 104 AILTSIQSLLDEPN 117
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
+L ++P G S +DN I WE +I GP +T +E G FK
Sbjct: 15 KLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFK 54
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 54.0 bits (124), Expect = 6e-08
Identities = 22/73 (30%), Positives = 42/73 (57%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
+ FP +YP +PP++ F T+I+HPN+D+ G C+ I+ +E W P E
Sbjct: 55 ITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTE 102
Query: 442 TILISVISMLAGP 480
++++++S++ P
Sbjct: 103 QVMMALLSLINEP 115
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
+ P EY PP +K +T++WHPNI+++G +C+SIL + D++G W P +
Sbjct: 81 ITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYG-------WRPTRNLT 133
Query: 442 TILISVISM 468
++ ++S+
Sbjct: 134 DVVHGLVSL 142
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
+ P +YP PP +KF T+IWHPN+ + G +C+ IL ++W T+
Sbjct: 60 IKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL-------------KDQWAASLTL 106
Query: 439 ETILISVISMLAGP 480
T+L+S+ +++ P
Sbjct: 107 RTVLLSIQALMCTP 120
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 447
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 448 LISVISMLAGPNDE 489
LI + +L PN E
Sbjct: 113 LIGIQDLLNHPNIE 126
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 188 DIYKWEVLIIGPPDTLYEGGFFK 256
+++ WE I G DT++EGG ++
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYR 59
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 447
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 448 LISVISMLAGPNDE 489
LI + +L PN E
Sbjct: 113 LIGIQDLLNHPNIE 126
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 188 DIYKWEVLIIGPPDTLYEGGFFK 256
+++ WE I G DT++EGG ++
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYR 59
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
F +YP P + FV E HP+I NG +C+SIL S+ W P +V+
Sbjct: 61 FGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQ 107
Query: 442 TILISVISMLAGPNDE 489
++ +S++SML+ ++
Sbjct: 108 SVCLSILSMLSSSKEK 123
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 131 AELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
A+L EG ND+ +W++ ++G TLY G F
Sbjct: 14 AQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVF 55
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 277 EYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHTVETILI 453
EYP +PP +KF ++HPN+D ++C +L E W P T+E +L+
Sbjct: 71 EYPFKPPYLKFCHNVYHPNVDPVTCELCSPML------------LQENWKPETTMEDVLL 118
Query: 454 SVISMLAGPN 483
++I +L P+
Sbjct: 119 NLIVLLNEPD 128
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 426
++ P +YP + P + F+ +I+HPNID+ +G VC+ ++++ + + +LP
Sbjct: 56 VDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNIFDTFLP 111
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L ++P S G + D D+Y W+ I+GPP++ Y+GG F
Sbjct: 12 DLGRDPPAQCSTGSVGD-DLYHWQATIMGPPESPYQGGIF 50
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Frame = +1
Query: 262 LNFPKEYPLRPPRM---------------KFVTEIWHPNI-DKNGDVCISILHEPGDDKW 393
++ P+ YP PP++ KFVT IWHPNI + G +C+ IL
Sbjct: 74 VDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDIL-------- 125
Query: 394 GYEKASERWLPVHTVETILISVISMLAGP 480
++W T+ T+L+S+ +ML P
Sbjct: 126 -----KDKWTASLTLRTVLLSLQAMLCSP 149
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 274 KEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKW 393
+ YP + P +KF+T+IWHP++ +G +C LH+ + W
Sbjct: 406 ESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDNGVW 443
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
L K PV A ++ N I +W +IIG P T YEGG + +FP++
Sbjct: 20 LLKEPVPFMKAAPLETN-ILEWRYIIIGAPKTPYEGGIYMGKLLFPKD 66
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 220 SPRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 399
+P+ G L FPK++P +PP + +T + N +C+SI
Sbjct: 47 APKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI----------S 94
Query: 400 EKASERWLPVHTVETILISVISML 471
+ + W P TV TI+ ++S +
Sbjct: 95 DYHPDTWNPAWTVSTIITGLMSFM 118
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVH 432
FP YP PP+ F+T ++PN+ +G +C+SIL W + E+W P
Sbjct: 468 FPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL-----GTW-EGRPEEKWNPYC 521
Query: 433 TVETILISV 459
++ +L+S+
Sbjct: 522 SLMQVLVSI 530
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
A+L ++PV+G A L ++++I +W + G PDT + GG++ IF N
Sbjct: 29 AKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKEN 77
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 447
FP +YP++PP + +T + + N VC+SI GY E WLP ++ T
Sbjct: 64 FPADYPMKPPNLILLTP--NGRFELNKKVCLSIS--------GYH--PETWLPSWSIRTA 111
Query: 448 LISVISML 471
L+++I L
Sbjct: 112 LLALIGFL 119
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
+ P E + A ++DN +++W I G T +EGG + IFP
Sbjct: 23 RQPTEMYHAQPMEDN-LFEWHFTIRGTLGTDFEGGIYHGRIIFP 65
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 35.9 bits (79), Expect = 0.016
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWL 423
+NF K +P+ PP +F T + HPN+D G + + +L + + W E + ++ L
Sbjct: 92 VNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ---EHWSSETSLKKLL 141
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 30.7 bits (66), Expect = 0.59
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 189 SLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMI 43
SL + ++P+ GFL + AN NK+++ GS I I P + I
Sbjct: 1100 SLPGSRMLKRPNFGFLSNIANDAINKAKEAGSQIQAAVPIKPSSSSSNI 1148
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 164 SAGLIDDND--IYKWEVLIIGPPDTLYEGGFF 253
S GL DD+D + +W IIGPP T YE +
Sbjct: 27 SWGLEDDSDMTLTRWTASIIGPPRTPYESRIY 58
>AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical
protein K07E8.10 protein.
Length = 155
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 252 KKPPSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKS 109
+ PP +S PIM Y S I + PST + SS+N F+KS
Sbjct: 104 QNPPKIVLSKRPIMDCQQFYQSSEDIDEEQVPSTSNVQSSSNAPSFSKS 152
>Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical
protein F26D10.9b protein.
Length = 177
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 171 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 34
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 17 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 62
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 171 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 34
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 453 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 498
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 243 PSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKSEDCGSDINYNCEIY 67
PS+S GP H++ +S P+ P+ F+ S+ ++ + D ++ Y +
Sbjct: 499 PSHSSHSGPAQAPQHIHFESASSTPSTPPAFHFIPPSSEAPYYVEINDADTETVYVSSVT 558
Query: 66 P 64
P
Sbjct: 559 P 559
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWH 327
L FP YP P++KF T IW+
Sbjct: 52 LTFPDNYPNALPQIKFQTLIWN 73
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 141 FSSANCFFNKSEDCGSDINYNCEIYPEDT--KQMIFRQKMAGRVLSRL 4
F ++C ++ E C + Y+C+ Y T KQM F ++ L R+
Sbjct: 160 FRLSSCIDDEIEPCENFYRYSCQRYHSQTADKQMSFLSQLKDESLRRM 207
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 141 FSSANCFFNKSEDCGSDINYNCEIYPEDT--KQMIFRQKMAGRVLSRL 4
F ++C ++ E C + Y+C+ Y T KQM F ++ L R+
Sbjct: 244 FRLSSCIDDEIEPCENFYRYSCQRYHSQTADKQMSFLSQLKDESLRRM 291
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 176 IDDNDIYKWEVLIIGPPDTLYEGG-FFKHI*IFP 274
ID+ + V+I GP ++YEGG FF I I P
Sbjct: 56 IDETKQLLFHVIIDGPVGSIYEGGTFFADINIQP 89
>AF067613-11|AAN73862.2| 334|Caenorhabditis elegans Serpentine
receptor, class z protein19 protein.
Length = 334
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -2
Query: 161 SLLLGFCSVQLIAFLIKAKTVXLTLITIVKFTL 63
++++ FCSV ++ L +A + L L+ + +FT+
Sbjct: 109 TIVMWFCSVTVLVGLTEAFNILLFLLAVSRFTI 141
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 314 LKYGIQILIKMVMSAYQYFTSQVMTNGVMKK 406
L I LI++V +Y YFT +++ ++KK
Sbjct: 459 LGLSILSLIQLVTYSYTYFTKKIVNERILKK 489
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 314 LKYGIQILIKMVMSAYQYFTSQVMTNGVMKK 406
L I LI++V +Y YFT +++ ++KK
Sbjct: 459 LGLSILSLIQLVTYSYTYFTKKIVNERILKK 489
>U41263-4|AAC24426.4| 779|Caenorhabditis elegans Hypothetical
protein T19D12.6 protein.
Length = 779
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 7 PAQNSASHLLSKNHLFRVFRVNFTIVINVRXTVFAFIKKAIS*TEQKPSRRLFCW 171
PA +S S S F N +++ ++ ++++ +I +KPS LF W
Sbjct: 373 PAPSSTSTKSSITWKVAHFNGNSNVIVPAPDSILSYLELSIQFKTEKPSGVLFFW 427
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 191 YHCHLLSQQKSLLLGFCSV 135
++CHLL +LLLGFCS+
Sbjct: 215 FYCHLLG---TLLLGFCSI 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,862,182
Number of Sequences: 27780
Number of extensions: 247604
Number of successful extensions: 685
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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