Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1684X
(489 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 125 2e-29
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 124 4e-29
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 122 1e-28
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 66 9e-12
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 65 3e-11
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 65 3e-11
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 65 3e-11
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 65 3e-11
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 65 3e-11
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 65 3e-11
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 65 3e-11
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 65 3e-11
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 64 4e-11
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 62 3e-10
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 61 3e-10
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 61 3e-10
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 61 3e-10
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 59 1e-09
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 57 6e-09
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 56 1e-08
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 55 3e-08
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 55 3e-08
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 55 3e-08
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 55 3e-08
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 55 3e-08
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 54 4e-08
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 54 5e-08
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 54 7e-08
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 53 9e-08
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 52 3e-07
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 48 3e-06
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 46 1e-05
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 46 1e-05
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 46 2e-05
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 45 2e-05
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 45 2e-05
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 45 3e-05
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 45 3e-05
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 43 1e-04
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 42 3e-04
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 38 0.005
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 36 0.011
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 35 0.026
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 35 0.034
At1g44000.1 68414.m05076 expressed protein 34 0.045
At4g10560.1 68417.m01729 DC1 domain-containing protein contains ... 32 0.24
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 32 0.24
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 30 0.96
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 30 0.96
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.7
At5g41820.1 68418.m05092 geranylgeranyl transferase alpha subuni... 29 2.2
At3g23790.1 68416.m02990 AMP-binding protein, putative similar t... 28 2.9
At2g02680.1 68415.m00207 DC1 domain-containing protein contains ... 28 2.9
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 28 3.9
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 5.1
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 27 5.1
At2g02690.1 68415.m00208 hypothetical protein 27 5.1
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 27 5.1
At5g21110.1 68418.m02516 hypothetical protein predicted protein ... 27 6.8
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0
At4g13260.1 68417.m02075 flavin-containing monooxygenase / FMO (... 27 9.0
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 125 bits (301), Expect = 2e-29
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P G F A ++FP+ YP+ PP + F +E+WHPN+ +G VCISILH PGDD GYE
Sbjct: 46 PDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYE 105
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
ASERW PVHTVE+I++S+ISML+GPNDE
Sbjct: 106 LASERWTPVHTVESIVLSIISMLSGPNDE 134
Score = 74.1 bits (174), Expect = 5e-14
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
+L K PV+GFSAGL+D+ ++++W V I+GPPDTLYEGGFF I FP N
Sbjct: 16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPEN 64
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 124 bits (298), Expect = 4e-29
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P G F A ++FP+ YP PP ++F ++IWHPN+ +G VCISILH PGDD GYE
Sbjct: 45 PDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYE 104
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
ASERW PVHTVE+I++S+ISML+GPNDE
Sbjct: 105 LASERWTPVHTVESIMLSIISMLSGPNDE 133
Score = 76.2 bits (179), Expect = 1e-14
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
+L K+PV+GFSAGL+D+ +I++W V IIGPPDTLYEGGFF I FP+N
Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQN 63
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 122 bits (295), Expect = 1e-28
Identities = 52/89 (58%), Positives = 66/89 (74%)
Frame = +1
Query: 223 PRHTIRGRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 402
P G F A + FP+ YP PP ++F +++WHPN+ +G VCISILH PGDD GYE
Sbjct: 77 PDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYE 136
Query: 403 KASERWLPVHTVETILISVISMLAGPNDE 489
ASERW PVHTVE+I++S+ISML+GPNDE
Sbjct: 137 LASERWTPVHTVESIMLSIISMLSGPNDE 165
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 179 DDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
D +I++W V IIGPPDTLYEGGFF I FP+N
Sbjct: 62 DCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQN 95
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 66.5 bits (155), Expect = 9e-12
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 241 GRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 420
G FL ++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W
Sbjct: 48 GVFL-VSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQW 93
Query: 421 LPVHTVETILISVISMLAGPNDE 489
P T+ +L+S+ S+L PN +
Sbjct: 94 SPALTISKVLLSICSLLTDPNPD 116
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GPP++ Y GG F
Sbjct: 12 DLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVF 50
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P TV
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.1 bits (77), Expect = 0.026
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L ++P SAG D D+++W+ I+GP D+ + GG F
Sbjct: 12 DLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVF 50
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P TV
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.1 bits (77), Expect = 0.026
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L ++P SAG D D+++W+ I+GP D+ + GG F
Sbjct: 12 DLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVF 50
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVF 50
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVF 50
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 55 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 101
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 102 KVLLSICSLLTDPNPD 117
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 134 ELNKNPVEG-FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P AG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCIFAGPVAE-DMFHWQATIMGPAESPYSGGVF 51
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVF 50
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVF 50
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 84 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 130
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 131 KVLLSICSLLTDPNPD 146
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP D+ Y GG F
Sbjct: 42 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVF 80
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP D+ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVF 50
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/83 (34%), Positives = 51/83 (61%)
Frame = +1
Query: 241 GRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 420
G FL +++FP +YP +PP++ F T+++HPNI+ NG++C+ IL ++W
Sbjct: 48 GVFL-VNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL-------------KDQW 93
Query: 421 LPVHTVETILISVISMLAGPNDE 489
P T+ +L+S+ S+L PN +
Sbjct: 94 SPALTISKVLLSICSLLTDPNPD 116
Score = 33.9 bits (74), Expect = 0.059
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
EL ++P SAG + D++ W+ I+GP ++ Y GG F
Sbjct: 12 ELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVF 50
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 64.5 bits (150), Expect = 4e-11
Identities = 26/76 (34%), Positives = 46/76 (60%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++FP +YP +PP++ F T+++HPN++ NG +C+ IL E+W P T+
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDIL-------------KEQWSPALTIS 100
Query: 442 TILISVISMLAGPNDE 489
+L+S+ S+L PN +
Sbjct: 101 KVLLSICSLLTDPNPD 116
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP D+ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVF 50
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++F +YP +PP++ F T+++HPNID G +C+ IL E+W P T
Sbjct: 55 IDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTS 101
Query: 442 TILISVISMLAGPN 483
+L+S+ S+L PN
Sbjct: 102 KVLLSICSLLTDPN 115
Score = 40.7 bits (91), Expect = 5e-04
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
++ ++P SAG + + DI+ W+ I+GP D+ Y GG F
Sbjct: 12 DMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVF 51
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P +
Sbjct: 58 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIR 104
Query: 442 TILISVISMLAGPNDE 489
T+L+S+ ++L+ PN +
Sbjct: 105 TVLLSIQALLSAPNPD 120
Score = 35.1 bits (77), Expect = 0.026
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L P G SA +DN Y + V+I+GP + YEGG FK
Sbjct: 17 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFK 55
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P +
Sbjct: 58 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIR 104
Query: 442 TILISVISMLAGPNDE 489
T+L+S+ ++L+ PN +
Sbjct: 105 TVLLSIQALLSAPNPD 120
Score = 33.5 bits (73), Expect = 0.078
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L P G SA ++N Y + V+I+GP + YEGG FK
Sbjct: 17 LLSEPAPGISASPSEENMRY-FNVMILGPTQSPYEGGVFK 55
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 61.3 bits (142), Expect = 3e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P +
Sbjct: 25 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIR 71
Query: 442 TILISVISMLAGPNDE 489
T+L+S+ ++L+ PN +
Sbjct: 72 TVLLSIQALLSAPNPD 87
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 200 WEVLIIGPPDTLYEGGFFK 256
+ V+I+GP + YEGG FK
Sbjct: 4 FNVMILGPTQSPYEGGVFK 22
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 59.3 bits (137), Expect = 1e-09
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
+ FP +YP +PP+ F T I+HPNI+ G +C++IL ++W P VE
Sbjct: 60 IKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMVE 106
Query: 442 TILISVISMLAGPNDE 489
+L+S++ +L PN +
Sbjct: 107 KVLLSILLLLEKPNPD 122
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 161 FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
FS G + N+IY+W +I GP T YEGG F FP
Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFP 63
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 57.2 bits (132), Expect = 6e-09
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L+F +YP +PP++KF T +HPN+D G++C+ IL ++W + V
Sbjct: 88 LSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDIL-------------QDKWSSAYDVR 134
Query: 442 TILISVISMLAGPN 483
TIL+S+ S+L PN
Sbjct: 135 TILLSIQSLLGEPN 148
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
+ P+ YP +PP + F T I+HPNID +G +C+ IL+ P W P +
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP---------PKGAWQPSLNIS 118
Query: 442 TILISVISMLAGPNDE 489
T+L S+ +L+ PN +
Sbjct: 119 TVLTSMRLLLSEPNPD 134
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
+ P YP PP+M+F T++WHPNI ++G +C+ IL ++W P T+
Sbjct: 56 ITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDIL-------------KDQWSPALTL 102
Query: 439 ETILISVISMLAGP 480
+T L+S+ ++L+ P
Sbjct: 103 KTALVSIQALLSAP 116
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 54.8 bits (126), Expect = 3e-08
Identities = 18/38 (47%), Positives = 30/38 (78%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 375
++FP +YP +PP++ F T+++HPNI+ NG +C+ IL E
Sbjct: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE 91
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
+L K+P SAG + + D++ W+ I+GP ++ Y GG F
Sbjct: 12 DLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVF 50
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVA 103
Query: 442 TILISVISMLAGPN 483
IL S+ S+L PN
Sbjct: 104 AILTSIQSLLCDPN 117
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L ++P G S G DN+I W +I GP DT ++GG FK
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVA 103
Query: 442 TILISVISMLAGPN 483
IL S+ S+L PN
Sbjct: 104 AILTSIQSLLCDPN 117
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L ++P G S G DN+I W +I GP DT ++GG FK
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVA 103
Query: 442 TILISVISMLAGPN 483
IL S+ S+L PN
Sbjct: 104 AILTSIQSLLCDPN 117
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L ++P G S G DN+I W +I GP DT ++GG FK
Sbjct: 16 LQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFK 54
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 54.4 bits (125), Expect = 4e-08
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L+F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVA 103
Query: 442 TILISVISMLAGPNDE 489
+L S+ S+L PN +
Sbjct: 104 AVLTSIQSLLCDPNPD 119
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L K+P G S G DN+I W LI GP DT ++GG FK
Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFK 54
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 54.0 bits (124), Expect = 5e-08
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 241 GRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 420
G F ++F ++YP +PP+ KF +HPN+ +G VC+SIL+E +G W
Sbjct: 56 GGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE----DYG-------W 104
Query: 421 LPVHTVETILISVISMLAGPN 483
P TV+ IL+ + +L PN
Sbjct: 105 RPAITVKQILVGIQDLLDTPN 125
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
L F +YP + P++KF T +HPN+D G++C+ IL ++W + V
Sbjct: 89 LTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDIL-------------QDKWSSAYDVR 135
Query: 442 TILISVISMLAGPN 483
TIL+S+ S+L PN
Sbjct: 136 TILLSIQSLLGEPN 149
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 53.2 bits (122), Expect = 9e-08
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 393
L P+EYP+ P+++F+T+I+HPNIDK G +C+ IL DKW
Sbjct: 58 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL----KDKW 97
Score = 35.1 bits (77), Expect = 0.026
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 137 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
L P G SA +DN Y + V+I+GP + YEGG FK
Sbjct: 17 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFK 55
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 51.6 bits (118), Expect = 3e-07
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 PKEYPLRPPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 447
P+ YPL+PP+++F+T+I+HPN+ K G++C+ IL W P T++++
Sbjct: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTLQSV 107
Query: 448 LISVISMLAGPNDE 489
++I+++A P +
Sbjct: 108 CRAIIALMAHPEPD 121
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 173 LIDDNDIYKWEVLIIGPPDTLYEGGFFK 256
+ DD +I+KW LI GP +T YEGG F+
Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQ 55
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
++ P +YP PP++ F T+I+HPNI + G++ + IL RW T+
Sbjct: 83 VHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDIL-------------GSRWSSALTIN 129
Query: 442 TILISVISMLAGP 480
+L+S+ S+L+ P
Sbjct: 130 LVLLSICSILSNP 142
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 46.4 bits (105), Expect = 1e-05
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +1
Query: 268 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 375
FP +YP +PP++ F T I+H N+D GD+ ++IL +
Sbjct: 91 FPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRD 126
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/48 (52%), Positives = 27/48 (56%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFP 274
AELN +P SAG DN +Y W IIGP T YEGG F IFP
Sbjct: 46 AELNIDPPPDCSAGPKGDN-LYHWIATIIGPSGTPYEGGIFFLDIIFP 92
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 280 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 459
YP P++K T+++HPNID G+VC++IL E W PV + T++ +
Sbjct: 89 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED-------------WKPVLNINTVIYGL 135
Query: 460 ISMLAGPNDE 489
+ PN E
Sbjct: 136 FHLFTEPNYE 145
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
+ FP+ YP+ P++ FV+ HP+I NG +C+ IL+ + W P TV
Sbjct: 67 VEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILY-------------DSWSPAMTV 113
Query: 439 ETILISVISMLA 474
++ IS++SML+
Sbjct: 114 NSVCISILSMLS 125
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLY 238
+E NP GF + D+ + KW + + G P TLY
Sbjct: 25 SEWQLNPPTGFRHKVTDN--LQKWTIDVTGAPGTLY 58
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 426
+ P YP + P + F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 53 VELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 426
+ P YP + P + F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 53 VELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
+ FP+ YP+ P++ FV HP+I NG +C+ IL+ + W P TV
Sbjct: 67 VEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTV 113
Query: 439 ETILISVISMLA 474
++ IS++SML+
Sbjct: 114 SSVCISILSMLS 125
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 131 AELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLY 238
+E NP GF + D+ + KW + + G P TLY
Sbjct: 25 SEWQVNPPTGFKHRVTDN--LQKWVIEVTGAPGTLY 58
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
++FP+ YP+ P++ F+ HP+I NG +C+ IL++ W P TV
Sbjct: 67 VDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDS-------------WSPAMTV 113
Query: 439 ETILISVISMLAGPNDE 489
+I IS++SML+ ++
Sbjct: 114 SSICISILSMLSSSTEK 130
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKHI*IFPRN 280
E NP GF + D+ + +W + +IG P TLY ++ FP +
Sbjct: 26 EWQMNPPTGFKHKVTDN--LQRWIIEVIGAPGTLYANDTYQLQVDFPEH 72
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 426
+ P+ YP + P + FV +I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 53 VELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLP 108
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 182 DNDIYKWEVLIIGPPDTLYEGGFFK 256
++D+ + V GP D+LY+GG +K
Sbjct: 26 NDDLQMFYVTFHGPTDSLYQGGVWK 50
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 41.5 bits (93), Expect = 3e-04
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 277 EYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWG 396
++P PP+ F+T+I+HPN+ NG++C++ L + + G
Sbjct: 68 DFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLG 107
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 438
+ FP+ YP+ P++ F HP+I NG +C+ +L+ + W P +
Sbjct: 67 VEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLY-------------DSWSPAMRL 113
Query: 439 ETILISVISMLA 474
+I +S++SML+
Sbjct: 114 SSICLSILSMLS 125
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 134 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 253
E+ NP + F + +++N I++W+ I GP DT +EGG +
Sbjct: 22 EMQANPSDDFMSLPLEEN-IFEWQFAIRGPGDTEFEGGIY 60
Score = 30.7 bits (66), Expect = 0.55
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 441
+ P +YP +PP +T + + N +C+SI + Y E W P +V
Sbjct: 64 IQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISN--------YH--PEHWQPSWSVR 111
Query: 442 TILISVIS-MLAGPN 483
T L+++I+ M PN
Sbjct: 112 TALVALIAFMPTSPN 126
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 35.1 bits (77), Expect = 0.026
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVH- 432
+ FP YP PP++ + + +PN+ K G VC+S++ W +K E+WLP
Sbjct: 658 IQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI-----STWTGKK-REKWLPKES 711
Query: 433 TVETILISVISML 471
T+ +L+S+ +++
Sbjct: 712 TMLQLLVSIQALI 724
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 34.7 bits (76), Expect = 0.034
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 164 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFK 256
S G+ D +DIY W I+GPP+T YEG F+
Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQ 65
>At1g44000.1 68414.m05076 expressed protein
Length = 260
Score = 34.3 bits (75), Expect = 0.045
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 415 VLKLFHNPICHHLAREVLICRHHHFYQYLDAIFQSQIS 302
++ +H+P+ H RE+ RHHH +++ + + +IS
Sbjct: 5 IVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRIS 42
>At4g10560.1 68417.m01729 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 703
Score = 31.9 bits (69), Expect = 0.24
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 388 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 278
C L R + I RHHH + + Q ++S GV K+I
Sbjct: 318 CIDLPRVIRISRHHHRISFTPSFDQERLSCGVCQKNI 354
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 265 NFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHE---PGDDKWGYEKAS 411
+ P +YP PP + + W +PN+ + G VC+S+L+ G++ W + +S
Sbjct: 904 HLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSS 957
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 164 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFK 256
S G+ D +DIY W IIGP +T++EG ++
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 67
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 29.9 bits (64), Expect = 0.96
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 164 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFK 256
S G+ D +DIY W IIGP +T++EG ++
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 268 NLNVLKETSLV*CVWGTNNEDFPFVYII 185
+L + ET L+ WG +N D PF++++
Sbjct: 273 SLVTINETELMEIAWGLSNSDQPFLWVV 300
>At5g41820.1 68418.m05092 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 687
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 346 HFYQYLDAIFQSQISSGVVSKDIPWENLNVLKETSLV*CVW 224
+F Q + + S ++ G KD+ WE ++ K + + CVW
Sbjct: 297 YFDQAVSGVSSSTVTIGSELKDLVWEPVSDKKNSQVDSCVW 337
>At3g23790.1 68416.m02990 AMP-binding protein, putative similar to
AMP-binding protein GB:CAA96521 from [Brassica napus]
(Plant Mol. Biol. (1997) 33 (5), 911-922); contains Pfam
AMP-binding enzyme domain PF00501; identical to cDNA
acyl-CoA synthetase-like protein GI:20799732
Length = 722
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 262 LNFPKEYPLRPPRMKFVTEIWHPNIDKNGD--VCISILHEP 378
L+ P+E L K V +IW +++K GD + H+P
Sbjct: 67 LSLPREAALSSNEWKSVPDIWRSSVEKYGDRVAVVDPYHDP 107
>At2g02680.1 68415.m00207 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 649
Score = 28.3 bits (60), Expect = 2.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -3
Query: 388 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 278
C ++ + + I RHHH + ++ + + S GV +++
Sbjct: 274 CIYIPQTIRISRHHHCISFTSSLLKGKWSCGVCRQEV 310
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 164 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFK 256
S G+ D +DI W I+GP +T YEG F+
Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQ 65
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1610
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 388 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 278
C L R + I RHHH + + + S GV K I
Sbjct: 318 CFSLPRVIRISRHHHRISFTHSFEKGDWSCGVCRKKI 354
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 271 PKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILH 372
P +YP PP + + + +PN+ ++G VC+S+L+
Sbjct: 718 PPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 388 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 278
C H+ + + I RHHH + ++ + S GV +++
Sbjct: 278 CIHVPQTIRISRHHHRVSFTSSLPLEKWSCGVCRREV 314
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 241 GRFL*AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 420
G F + FP EYP +PP + T K +C+S+ + E W
Sbjct: 51 GGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKK--ICLSM----------SDFHPESW 98
Query: 421 LPVHTVETILISVISML 471
P+ +V +IL ++S +
Sbjct: 99 NPMWSVSSILTGLLSFM 115
>At5g21110.1 68418.m02516 hypothetical protein predicted protein -
Arabidopsis thaliana, EMBL:AL163852
Length = 92
Score = 27.1 bits (57), Expect = 6.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 298 RMKFVTEIWHPNIDKNGDVCISILHEPGDDK-WGYEKASERWLPVHTVETILISVISMLA 474
R + T I P + + D+CI + E GD W Y + V +LI +I + A
Sbjct: 6 RSRSWTFIGQPRVATSVDMCIGLRKEAGDQSLWEYPSIVD---GVKITPFVLIRIIYLEA 62
Query: 475 GPN 483
G N
Sbjct: 63 GIN 65
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 26.6 bits (56), Expect = 9.0
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = -3
Query: 280 IPWENLNVLKETSLV*CVWGTNNEDFPFVYII 185
+ + ++ + E+ L+ WG N D PF+ ++
Sbjct: 273 VSYGSIVTISESDLIEIAWGLRNSDQPFLLVV 304
>At4g13260.1 68417.m02075 flavin-containing monooxygenase / FMO
(YUCCA2) identical to gi:16555354
Length = 415
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 379 GDDKWGYEKASERWLPVHTVETILISVISMLAGPND 486
G +G + +W PVH V+ L+ + ++ G D
Sbjct: 236 GISTFGISTSLLKWFPVHVVDRFLLRMSRLVLGDTD 271
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,094,167
Number of Sequences: 28952
Number of extensions: 227244
Number of successful extensions: 810
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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