Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1679
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 285 ECKKVAKTEVLDPDFEEDLSLWMCLRCGT 371
           E  KV +  +LD D+  +  +WM L C +
Sbjct: 389 EGMKVFEELLLDADWSVNAGMWMWLSCSS 417


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/38 (23%), Positives = 22/38 (57%)
 Frame = +1

Query: 292 KKLQKLRYLIQILKKICPCGCVYXVARNSVAEHAINML 405
           KKL+++R + ++  ++   GC   +  + V +H I ++
Sbjct: 24  KKLEQMRQVHEVDNQLKQMGCDLDIPNSVVQKHLILLM 61


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 336 LLQNLDQVPQFLQLFCTLNILFQILRFY 253
           LL+NL    +    F   N+LFQ++  Y
Sbjct: 89  LLENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 300 QLFCTLNILFQILRFYSFL*PSQIYCFRDVRTC 202
           Q+F T  + F IL + SF     ++C      C
Sbjct: 131 QIFITCELFFVILLWISFFLNFMLHCNNTTWRC 163


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 336 LLQNLDQVPQFLQLFCTLNILFQILRFY 253
           LL+NL    +    F   N+LFQ++  Y
Sbjct: 89  LLENLKLDRENNSSFVVANVLFQLIHVY 116


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 336 LLQNLDQVPQFLQLFCTLNILFQILRFY 253
           LL+NL    +    F   N+LFQ++  Y
Sbjct: 409 LLENLKLDRENNSSFVVANVLFQLIHVY 436


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 333 EDLSLWMCLRCGTQLC 380
           ++ ++ +C+RC  QLC
Sbjct: 228 DEQTIDICMRCHDQLC 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,694
Number of Sequences: 336
Number of extensions: 2724
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)