Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1679
(657 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 5.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.9
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 7.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 7.8
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 570 VLLARNXFLRYSMHSWSFLAVMQ*LHYYSCNSR 472
V L+ + + Y M + LA M LHYY +S+
Sbjct: 141 VRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQ 173
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 285 ECKKVAKTEVLDPDFEEDLSLWMCLRCGT 371
E KV +LD D+ + +WM L C +
Sbjct: 393 EGMKVFDELLLDADWSVNAGMWMWLSCSS 421
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 204 CGFYVLFARLC*FVSIFSRVALSL 133
C FY+ C SIF+ VA+S+
Sbjct: 259 CDFYIAMDVTCSTSSIFNLVAISI 282
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST+TTV +K
Sbjct: 129 PGKSTITTVEVK 140
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST+TTV +K
Sbjct: 140 PGKSTITTVEVK 151
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 381 HRVACHXVNTSTRTNLLQNL 322
HR ACH ++ T++ L++ L
Sbjct: 132 HRAACHSGSSLTKSRLMRCL 151
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 129 PGKSTTTTVEVK 140
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 129 PGKSTTTTVEVK 140
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 129 PGKSTTTTVEVK 140
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 129 PGKSTTTTVEVK 140
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 145 PGKSTTTTVEVK 156
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 463 PGKSTVTTVIMK 498
PGKST TTV +K
Sbjct: 140 PGKSTTTTVEVK 151
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 432 DCYALAANSTTWEIYCYN 485
D Y LAAN T W + +N
Sbjct: 196 DYYLLAANYTGWYLTKHN 213
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 432 DCYALAANSTTWEIYCYN 485
D Y LAAN T W + +N
Sbjct: 196 DYYLLAANYTGWYLTKHN 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,418
Number of Sequences: 438
Number of extensions: 2822
Number of successful extensions: 32
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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