Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1678X
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051846-1|AAK93270.1| 1126|Drosophila melanogaster LD34905p pro...    33   0.14 
AE014298-743|AAN09142.1| 1126|Drosophila melanogaster CG4165-PD,...    33   0.14 
AE014298-742|AAN09141.1| 1126|Drosophila melanogaster CG4165-PC,...    33   0.14 
AE014298-741|AAN09140.1| 1126|Drosophila melanogaster CG4165-PB,...    33   0.14 
AE014298-740|AAF46033.1| 1126|Drosophila melanogaster CG4165-PA,...    33   0.14 
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro...    27   5.2  
AY089505-1|AAL90243.1|  343|Drosophila melanogaster GH13901p pro...    27   5.2  
AE013599-2382|AAF57926.1|  343|Drosophila melanogaster CG9010-PA...    27   5.2  
U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog pr...    27   6.9  
BT021407-1|AAX33555.1|  720|Drosophila melanogaster LD06749p pro...    27   6.9  
BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p pro...    27   6.9  
AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p pro...    27   6.9  
AF162774-1|AAF68853.2|  720|Drosophila melanogaster Nopp140-like...    27   6.9  
AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA...    27   6.9  
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA...    27   6.9  
AE014296-3628|AAF51788.3|  720|Drosophila melanogaster CG7421-PA...    27   6.9  
AE014296-3627|AAF51789.2|  686|Drosophila melanogaster CG7421-PB...    27   6.9  
AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA...    27   6.9  
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P...    27   6.9  

>AY051846-1|AAK93270.1| 1126|Drosophila melanogaster LD34905p
           protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 SACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKKLQK 305
           ++C H+ KAVD  RL++ +KS  L       +KL K
Sbjct: 43  ASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGK 78


>AE014298-743|AAN09142.1| 1126|Drosophila melanogaster CG4165-PD,
           isoform D protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 SACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKKLQK 305
           ++C H+ KAVD  RL++ +KS  L       +KL K
Sbjct: 43  ASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGK 78


>AE014298-742|AAN09141.1| 1126|Drosophila melanogaster CG4165-PC,
           isoform C protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 SACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKKLQK 305
           ++C H+ KAVD  RL++ +KS  L       +KL K
Sbjct: 43  ASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGK 78


>AE014298-741|AAN09140.1| 1126|Drosophila melanogaster CG4165-PB,
           isoform B protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 SACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKKLQK 305
           ++C H+ KAVD  RL++ +KS  L       +KL K
Sbjct: 43  ASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGK 78


>AE014298-740|AAF46033.1| 1126|Drosophila melanogaster CG4165-PA,
           isoform A protein.
          Length = 1126

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 198 SACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKKLQK 305
           ++C H+ KAVD  RL++ +KS  L       +KL K
Sbjct: 43  ASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGK 78


>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p
           protein.
          Length = 1767

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTESCEENVKS 200
           T + KK QSD G+NG    ES E+   S
Sbjct: 154 TSMAKKSQSDSGQNGGSIRESSEKEPDS 181


>AY089505-1|AAL90243.1|  343|Drosophila melanogaster GH13901p
           protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 207 PHVAKAVDLT-RLKKAIKSEDLKKNVQSAKKLQ 302
           P+V+  VDLT RL K  K +D+KK +++A K +
Sbjct: 236 PNVS-VVDLTCRLSKPAKMDDIKKCIKAASKCE 267


>AE013599-2382|AAF57926.1|  343|Drosophila melanogaster CG9010-PA
           protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 207 PHVAKAVDLT-RLKKAIKSEDLKKNVQSAKKLQ 302
           P+V+  VDLT RL K  K +D+KK +++A K +
Sbjct: 236 PNVS-VVDLTCRLSKPAKMDDIKKCIKAASKCE 267


>U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog
           protein.
          Length = 770

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 132 KRQSDPGENGDESTE 176
           + QSDPGE G+E TE
Sbjct: 705 QEQSDPGEQGEEETE 719


>BT021407-1|AAX33555.1|  720|Drosophila melanogaster LD06749p
           protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTE--SCEENV-KSACPHVAKAVDLTRLKKAIKSEDLKKNVQS 287
           T+ K   ++ P +  D STE  S E++  K   P  A        KKA  S+D     ++
Sbjct: 302 TLAKPISKAAPTKKADSSTEDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEA 361

Query: 288 AKK 296
            KK
Sbjct: 362 PKK 364



 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 165 ESTESCEENVKSACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKK 296
           + + S EE  K A P  A     T  KKA  S+D     ++ KK
Sbjct: 385 DDSSSEEEAPKKAAPAKATPAKATPAKKAASSDDSSSEEEAPKK 428


>BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p
           protein.
          Length = 760

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 132 KRQSDPGENGDESTE 176
           + QSDPGE G+E TE
Sbjct: 705 QEQSDPGEQGEEETE 719


>AY069545-1|AAL39690.1|  627|Drosophila melanogaster LD27336p
           protein.
          Length = 627

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 49  LKPFYCNIYYYFNICKRDYVHKTQWLKKRDRATLEKMETNQQSLAKR 189
           +KP + N++    I ++    K +WL ++ R T+E  E   +  AKR
Sbjct: 564 VKPRHRNLFRKL-IREKQTKEKEEWLLRKKRRTIEANEKEARKTAKR 609


>AF162774-1|AAF68853.2|  720|Drosophila melanogaster Nopp140-like
           nucleolar protein protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTE--SCEENV-KSACPHVAKAVDLTRLKKAIKSEDLKKNVQS 287
           T+ K   ++ P +  D STE  S E++  K   P  A        KKA  S+D     ++
Sbjct: 302 TLAKPISKAAPTKKADSSTEDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEA 361

Query: 288 AKK 296
            KK
Sbjct: 362 PKK 364



 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 165 ESTESCEENVKSACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKK 296
           + + S EE  K A P  A     T  KKA  S+D     ++ KK
Sbjct: 385 DDSSSEEEAPKKAAPAKATPAKATPAKKAASSDDSSSEEEAPKK 428


>AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA
           protein.
          Length = 770

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 132 KRQSDPGENGDESTE 176
           + QSDPGE G+E TE
Sbjct: 705 QEQSDPGEQGEEETE 719


>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
            protein.
          Length = 3111

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 114  DTMVKKKRQSDPGENGDESTESCEENVKSA 203
            D  +K+K +  PG+ G E+ E+   NVK +
Sbjct: 1214 DHKIKEKSEEAPGKAGKETAETKNANVKDS 1243


>AE014296-3628|AAF51788.3|  720|Drosophila melanogaster CG7421-PA,
           isoform A protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTE--SCEENV-KSACPHVAKAVDLTRLKKAIKSEDLKKNVQS 287
           T+ K   ++ P +  D STE  S E++  K   P  A        KKA  S+D     ++
Sbjct: 302 TLAKPISKAAPTKKADSSTEDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEA 361

Query: 288 AKK 296
            KK
Sbjct: 362 PKK 364



 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 165 ESTESCEENVKSACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKK 296
           + + S EE  K A P  A     T  KKA  S+D     ++ KK
Sbjct: 385 DDSSSEEEAPKKAAPAKATPAKATPAKKAASSDDSSSEEEAPKK 428


>AE014296-3627|AAF51789.2|  686|Drosophila melanogaster CG7421-PB,
           isoform B protein.
          Length = 686

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTE--SCEENV-KSACPHVAKAVDLTRLKKAIKSEDLKKNVQS 287
           T+ K   ++ P +  D STE  S E++  K   P  A        KKA  S+D     ++
Sbjct: 302 TLAKPISKAAPTKKADSSTEDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEA 361

Query: 288 AKK 296
            KK
Sbjct: 362 PKK 364



 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 165 ESTESCEENVKSACPHVAKAVDLTRLKKAIKSEDLKKNVQSAKK 296
           + + S EE  K A P  A     T  KKA  S+D     ++ KK
Sbjct: 385 DDSSSEEEAPKKAAPAKATPAKATPAKKAASSDDSSSEEEAPKK 428


>AE014134-1680|AAF52800.1|  627|Drosophila melanogaster CG4364-PA
           protein.
          Length = 627

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 49  LKPFYCNIYYYFNICKRDYVHKTQWLKKRDRATLEKMETNQQSLAKR 189
           +KP + N++    I ++    K +WL ++ R T+E  E   +  AKR
Sbjct: 564 VKPRHRNLFRKL-IREKQTKEKEEWLLRKKRRTIEANEKEARKTAKR 609


>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
           protein.
          Length = 1767

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 117 TMVKKKRQSDPGENGDESTESCEENVKS 200
           T   KK QSD G+NG    ES E+   S
Sbjct: 154 TSTAKKSQSDSGQNGGSIRESSEKEPDS 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,104
Number of Sequences: 53049
Number of extensions: 180730
Number of successful extensions: 852
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)