BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1677X
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M83233-1|AAB62389.1| 682|Homo sapiens transcription factor prot... 58 1e-08
M80627-1|AAA58632.1| 682|Homo sapiens helix-loop-helix protein ... 58 1e-08
M65209-1|AAC37571.1| 331|Homo sapiens helix-loop-helix protein ... 58 1e-08
BX537967-1|CAD97931.1| 530|Homo sapiens hypothetical protein pr... 58 1e-08
BC050556-1|AAH50556.1| 706|Homo sapiens transcription factor 12... 58 1e-08
AL831981-1|CAD89914.1| 682|Homo sapiens hypothetical protein pr... 58 1e-08
X52079-1|CAA36298.1| 622|Homo sapiens ITF-2 DNA binding protein... 56 3e-08
M74719-1|AAA60311.1| 667|Homo sapiens SEF2-1B protein protein. 56 3e-08
M74718-1|AAA60310.1| 495|Homo sapiens SEF2-1A protein protein. 56 3e-08
BC125085-1|AAI25086.1| 667|Homo sapiens transcription factor 4 ... 56 3e-08
BC125084-1|AAI25085.1| 671|Homo sapiens TCF4 protein protein. 56 3e-08
M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein. 55 7e-08
M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein. 55 7e-08
M24405-1|AAA56830.1| 440|Homo sapiens kappa-E2-binding factor p... 55 7e-08
BC110580-1|AAI10581.1| 658|Homo sapiens TCF3 protein protein. 55 7e-08
BC011665-1|AAH11665.1| 591|Homo sapiens TCF3 protein protein. 55 7e-08
AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein. 55 7e-08
X52078-1|CAA36297.1| 582|Homo sapiens ITF-1 DNA binding protein... 51 1e-06
M65214-1|AAC41693.1| 141|Homo sapiens helix-loop-helix protein ... 51 1e-06
M24404-1|AAA56829.1| 133|Homo sapiens kappa-E2-binding factor p... 51 1e-06
BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein. 51 1e-06
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 28 9.3
>M83233-1|AAB62389.1| 682|Homo sapiens transcription factor
protein.
Length = 682
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 562 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 615
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 616 KLLILHQAVAVILSLEQQVRERNLNPKAACL 646
>M80627-1|AAA58632.1| 682|Homo sapiens helix-loop-helix protein
protein.
Length = 682
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 562 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 615
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 616 KLLILHQAVAVILSLEQQVRERNLNPKAACL 646
>M65209-1|AAC37571.1| 331|Homo sapiens helix-loop-helix protein
transcription factor 4 protein.
Length = 331
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 211 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 264
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 265 KLLILHQAVAVILSLEQQVRERNLNPKAACL 295
>BX537967-1|CAD97931.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 410 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 463
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 464 KLLILHQAVAVILSLEQQVRERNLNPKAACL 494
>BC050556-1|AAH50556.1| 706|Homo sapiens transcription factor 12
(HTF4, helix-loop-helix transcription factors 4)
protein.
Length = 706
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 586 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 639
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 640 KLLILHQAVAVILSLEQQVRERNLNPKAACL 670
>AL831981-1|CAD89914.1| 682|Homo sapiens hypothetical protein
protein.
Length = 682
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
+++D++P+ K +R+RDINEA KELGRMC HLKS+KPQT
Sbjct: 562 EDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQT 615
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 616 KLLILHQAVAVILSLEQQVRERNLNPKAACL 646
>X52079-1|CAA36298.1| 622|Homo sapiens ITF-2 DNA binding protein
protein.
Length = 622
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
D++D+ P+ K +R+RDINEA KELGRM HLKSDKPQT
Sbjct: 504 DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQT 557
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 558 KLLILHQAVAVILSLEQQVRERNLNPKAACL 588
>M74719-1|AAA60311.1| 667|Homo sapiens SEF2-1B protein protein.
Length = 667
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
D++D+ P+ K +R+RDINEA KELGRM HLKSDKPQT
Sbjct: 549 DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQT 602
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 603 KLLILHQAVAVILSLEQQVRERNLNPKAACL 633
>M74718-1|AAA60310.1| 495|Homo sapiens SEF2-1A protein protein.
Length = 495
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
D++D+ P+ K +R+RDINEA KELGRM HLKSDKPQT
Sbjct: 377 DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQT 430
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 431 KLLILHQAVAVILSLEQQVRERNLNPKAACL 461
>BC125085-1|AAI25086.1| 667|Homo sapiens transcription factor 4
protein.
Length = 667
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
D++D+ P+ K +R+RDINEA KELGRM HLKSDKPQT
Sbjct: 549 DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQT 602
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 603 KLLILHQAVAVILSLEQQVRERNLNPKAACL 633
>BC125084-1|AAI25085.1| 671|Homo sapiens TCF4 protein protein.
Length = 671
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 92 DEDDVDPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
D++D+ P+ K +R+RDINEA KELGRM HLKSDKPQT
Sbjct: 553 DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQT 606
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI++LEQQVRERNLNPKAACL
Sbjct: 607 KLLILHQAVAVILSLEQQVRERNLNPKAACL 637
>M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein.
Length = 654
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 533 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 587
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 588 KLLILHQAVSVILNLEQQVRERNLNPKAACL 618
>M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein.
Length = 648
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 527 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 581
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 582 KLLILHQAVSVILNLEQQVRERNLNPKAACL 612
>M24405-1|AAA56830.1| 440|Homo sapiens kappa-E2-binding factor
protein.
Length = 440
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 319 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 373
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 374 KLLILHQAVSVILNLEQQVRERNLNPKAACL 404
>BC110580-1|AAI10581.1| 658|Homo sapiens TCF3 protein protein.
Length = 658
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 537 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 591
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 592 KLLILHQAVSVILNLEQQVRERNLNPKAACL 622
>BC011665-1|AAH11665.1| 591|Homo sapiens TCF3 protein protein.
Length = 591
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 470 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 524
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 525 KLLILHQAVSVILNLEQQVRERNLNPKAACL 555
>AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein.
Length = 606
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 DEDDV-DPDTKXXXXXXXXXXXXXXXXIRIRDINEALKELGRMCMTHLKSDKPQT 253
DEDD+ P+ K +R+RDINEA KELGRMC HL S+KPQT
Sbjct: 485 DEDDLLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSEKPQT 539
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 253 QLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+L IL+ AV VI+ LEQQVRERNLNPKAACL
Sbjct: 540 KLLILHQAVSVILNLEQQVRERNLNPKAACL 570
>X52078-1|CAA36297.1| 582|Homo sapiens ITF-1 DNA binding protein
protein.
Length = 582
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 170 IRIRDINEALKELGRMCMTHLKSDKPQT 253
+R+RDINEA +ELGRMC HLKSDK QT
Sbjct: 488 VRVRDINEAFRELGRMCQMHLKSDKAQT 515
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 241 QAADQLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+A +L IL AV+VI+ LEQQVRERNLNPKAACL
Sbjct: 512 KAQTKLLILQQAVQVILGLEQQVRERNLNPKAACL 546
>M65214-1|AAC41693.1| 141|Homo sapiens helix-loop-helix protein
HE47 protein.
Length = 141
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 170 IRIRDINEALKELGRMCMTHLKSDKPQT 253
+R+RDINEA +ELGRMC HLKSDK QT
Sbjct: 47 VRVRDINEAFRELGRMCQMHLKSDKAQT 74
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 241 QAADQLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+A +L IL AV+VI+ LEQQVRERNLNPKAACL
Sbjct: 71 KAQTKLLILQQAVQVILGLEQQVRERNLNPKAACL 105
>M24404-1|AAA56829.1| 133|Homo sapiens kappa-E2-binding factor
protein.
Length = 133
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 170 IRIRDINEALKELGRMCMTHLKSDKPQT 253
+R+RDINEA +ELGRMC HLKSDK QT
Sbjct: 82 VRVRDINEAFRELGRMCQMHLKSDKAQT 109
Score = 35.5 bits (78), Expect = 0.062
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 241 QAADQLGILNMAVEVIMTLEQQVRERNL 324
+A +L IL AV+VI+ LEQQVRERNL
Sbjct: 106 KAQTKLLILQQAVQVILGLEQQVRERNL 133
>BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein.
Length = 651
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 170 IRIRDINEALKELGRMCMTHLKSDKPQT 253
+R+RDINEA +ELGRMC HLKSDK QT
Sbjct: 557 VRVRDINEAFRELGRMCQMHLKSDKAQT 584
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 241 QAADQLGILNMAVEVIMTLEQQVRERNLNPKAACL 345
+A +L IL AV+VI+ LEQQVRERNLNPKAACL
Sbjct: 581 KAQTKLLILQQAVQVILGLEQQVRERNLNPKAACL 615
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 142 PPGQQCQGEDKNKGHKRSPEGAGKDVYDAPQE 237
PP QQ Q + + + + P+G +Y PQE
Sbjct: 356 PPPQQQQQQQQQQQQREGPDGCNIFIYHLPQE 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,016,429
Number of Sequences: 237096
Number of extensions: 819083
Number of successful extensions: 2424
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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