Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1674X
(578 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 73 4e-14
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 69 5e-13
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 66 3e-12
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 64 1e-11
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 63 3e-11
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 51 1e-07
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 50 2e-07
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 49 4e-07
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 40 3e-04
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 28 0.86
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 27 1.5
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 26 3.5
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 4.6
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 25 6.1
SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces... 25 8.0
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 72.5 bits (170), Expect = 4e-14
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +3
Query: 306 RVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAG-----S 470
+ YA+D VF Q+ ++ + +P++EQVL GYN TIFAYGQTGT KTYTM+G
Sbjct: 118 KTYAFDKVFGPEADQLMLFENSVAPMLEQVLNGYNCTIFAYGQTGTGKTYTMSGDLSDSD 177
Query: 471 STAPELRGIIPNSLH 515
E G+IP +L+
Sbjct: 178 GILSEGAGLIPRALY 192
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 68.9 bits (161), Expect = 5e-13
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPEL 488
YA+D VFD +Q +Y +TA P+++ +L G+N TIFAYG TG KT+T++G+ P L
Sbjct: 105 YAFDRVFDETATQQQVYERTARPLLDNILDGFNATIFAYGATGCGKTHTISGTMQDPGL 163
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAP 482
YA+D +F SQ D+Y T P+++ VL+GYN T+FAYG TG KT+T++G P
Sbjct: 95 YAFDRLFGEEASQEDVYKGTTEPLLDSVLQGYNATVFAYGATGCGKTHTISGRPDDP 151
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 64.1 bits (149), Expect = 1e-11
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
Y ++ VF + DIY ++ +V V GYNG +FAYG TGT KTY+M G+ P
Sbjct: 179 YLFNNVFGMESKNYDIYKRSVKSVVRNVFSGYNGIVFAYGMTGTGKTYSMQGTENEP--- 235
Query: 492 GIIPNSLH 515
GIIP +++
Sbjct: 236 GIIPLAMN 243
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 62.9 bits (146), Expect = 3e-11
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
+ +D VF +++Q DI+ + V+ + GYNGT+ AYGQTG+ KTYTM G E
Sbjct: 45 FVFDRVFHPSSTQNDIFSYSIESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGIENNFEKE 104
Query: 492 GIIPNSL 512
G+ P L
Sbjct: 105 GMTPRML 111
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
+ +D VF T+ D++ + S +++ + GYN IFAYGQTG+ KT+TM+ ++
Sbjct: 525 FNFDRVFSPETTNEDVFNEL-SQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNT------ 577
Query: 492 GIIPNSL 512
G+IP+S+
Sbjct: 578 GMIPSSV 584
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 50.4 bits (115), Expect = 2e-07
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Frame = +3
Query: 303 PRVYAYDAVF------DSNTS-QMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTM 461
PR +A+D F N S Q D+Y T +V+ +L+G+N YGQ GT KTY++
Sbjct: 58 PRTFAFDECFAPSAPESKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYSV 117
Query: 462 AGSSTAPELRGIIPN 506
G P GIIP+
Sbjct: 118 VGLRGQP---GIIPH 129
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 49.2 bits (112), Expect = 4e-07
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMA 464
+++D VF + ++ + S +++ + GYN +IFAYGQTG+ KTYTM+
Sbjct: 537 FSFDRVFAPESDNSSVF-EEISQLIQSAIDGYNVSIFAYGQTGSGKTYTMS 586
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 39.5 bits (88), Expect = 3e-04
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 315 AYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGT-IFAYGQTGTRKTYTMAGSSTAP 482
++ VF + +Q+D++ +P++ L N T +F G +G KTYT+ G S P
Sbjct: 55 SFTKVFPPSCTQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGPSDRP 111
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 28.3 bits (60), Expect = 0.86
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -3
Query: 336 SRRQHRKHKREAALEASRCSWSQPQSR 256
S++Q ++ K +AALEAS+ SW Q +R
Sbjct: 229 SQKQQKQLKPKAALEASQNSWKQFAAR 255
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.5 bits (58), Expect = 1.5
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 174 SGGGSRAAHGP-EGENGRLLQLRVRRFRNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQ 350
S G H P +G + L ++ F NG+ VTR + T + Y +S++S+
Sbjct: 461 SEAGDFEYHDPIDGSESKHQGLYIK-FENGSRIVTRLSGTGSSGATLRLYMEKHESDSSK 519
Query: 351 MDIYVQTA-SPIVEQVLK 401
D+ Q A P+V L+
Sbjct: 520 FDLDAQVALKPVVHAALE 537
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 383 CRASPQRVQRHYIRVRADGNTEDLYNGGQQHGSRTQGDHTELFAHI 520
CR P+ + Y ADG LYNG + +R + + H+
Sbjct: 423 CRIPPETMASLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHL 468
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 291 PPEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQV 395
PP P + A + FD+ + D + ++P VE+V
Sbjct: 276 PPVPQNLSAVNEEFDTKKNDFDSKLPESTPAVEKV 310
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 310 FMLTMLSSTLTPVRWTYTSK 369
F+L M SS L+ +RW T K
Sbjct: 206 FLLVMASSVLSGLRWALTQK 225
>SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 25.0 bits (52), Expect = 8.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 505 FGMIPLSSGAVLLPAIV*VFRVPVCPYANIVPLYPLRTCSTIGLA 371
F L A+ L + +FR + +VPL PL S IGL+
Sbjct: 165 FSFAGLGFLAIFLAGQLKMFRNKTSSWKVVVPLVPLSIASWIGLS 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,013
Number of Sequences: 5004
Number of extensions: 48986
Number of successful extensions: 134
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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