Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1674X
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 75 4e-14
SB_12394| Best HMM Match : Kinesin (HMM E-Value=1.3e-38) 73 2e-13
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 69 4e-12
SB_47077| Best HMM Match : Kinesin (HMM E-Value=1.7e-27) 68 5e-12
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 68 6e-12
SB_39336| Best HMM Match : Kinesin (HMM E-Value=0) 68 6e-12
SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 8e-12
SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_7436| Best HMM Match : Kinesin (HMM E-Value=0.00023) 64 1e-10
SB_54210| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_36042| Best HMM Match : Kinesin (HMM E-Value=0) 58 4e-09
SB_21941| Best HMM Match : Kinesin (HMM E-Value=0) 58 4e-09
SB_20166| Best HMM Match : Kinesin (HMM E-Value=0) 58 5e-09
SB_45045| Best HMM Match : Kinesin (HMM E-Value=0) 56 2e-08
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_40388| Best HMM Match : Kinesin (HMM E-Value=0) 52 4e-07
SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30) 50 1e-06
SB_18382| Best HMM Match : Kinesin (HMM E-Value=2.3e-14) 50 2e-06
SB_6601| Best HMM Match : Kinesin (HMM E-Value=1.5e-05) 46 2e-05
SB_39634| Best HMM Match : Kinesin (HMM E-Value=9.9e-39) 46 2e-05
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_40762| Best HMM Match : Kinesin (HMM E-Value=8.5e-15) 44 7e-05
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 44 1e-04
SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_28964| Best HMM Match : Kinesin (HMM E-Value=2.4e-05) 43 2e-04
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 43 2e-04
SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 33 0.22
SB_11127| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 32 0.39
SB_50557| Best HMM Match : Kinesin (HMM E-Value=9.6e-24) 30 1.2
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.6
SB_43995| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_37664| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48684| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-05) 28 4.8
SB_43088| Best HMM Match : SDF (HMM E-Value=4.1e-08) 28 4.8
SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08) 28 4.8
SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1) 28 4.8
SB_30525| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 27 8.4
SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 27 8.4
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/71 (43%), Positives = 48/71 (67%)
Frame = +3
Query: 297 EPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSST 476
+PP+ + +D + +++ +IY P+VE VL+GYNGT+FAYGQTG K+++M G +
Sbjct: 46 QPPKAFTFDGAYFIDSTTENIYNDICFPLVEGVLEGYNGTVFAYGQTGCGKSFSMMGITD 105
Query: 477 APELRGIIPNS 509
P RGIIP +
Sbjct: 106 PPTQRGIIPRA 116
>SB_12394| Best HMM Match : Kinesin (HMM E-Value=1.3e-38)
Length = 256
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Frame = +3
Query: 294 PEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSS 473
PEP + +++D V D+NT Q +++ A IVE + GYNGTIFAYGQTG+ KT+TM G +
Sbjct: 72 PEP-KTFSFDHVADTNTMQEEVFGAVAKNIVEGCVDGYNGTIFAYGQTGSGKTFTMLGPA 130
Query: 474 TAP------ELRGIIP 503
ELRG+IP
Sbjct: 131 EGEAECFTHELRGVIP 146
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = +3
Query: 306 RVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTA-- 479
R + +D VF + SQ+++Y P+V+ L+GYN T+FAYGQTG+ KTYT+ G T
Sbjct: 628 RGFTFDYVFQPDASQVEVYESCIEPLVKSCLEGYNATVFAYGQTGSGKTYTIGGLDTGGL 687
Query: 480 -PELRGIIPNSL 512
+ GIIP ++
Sbjct: 688 MDDQYGIIPRAV 699
>SB_47077| Best HMM Match : Kinesin (HMM E-Value=1.7e-27)
Length = 212
Score = 68.1 bits (159), Expect = 5e-12
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
Y +D F SQ++++ +T P+++ V+ GYN T+FAYG TG KTYTM G+ + +
Sbjct: 53 YVFDHAFGPTASQVEVFSKTTKPLIDGVVSGYNATVFAYGATGAGKTYTMLGTDSEIGIM 112
Query: 492 GIIPNSL 512
G+ N+L
Sbjct: 113 GLTLNNL 119
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 339 NTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIPNSL 512
N SQ +Y + A +V L GYNGT+ AYGQTG+ KT+TM GS+ E RGIIP S+
Sbjct: 63 NASQETVYEECARKLVTSTLDGYNGTVMAYGQTGSGKTFTMTGSTEKFEHRGIIPRSI 120
>SB_39336| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 558
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 339 NTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIPNSL 512
N SQ +Y + A +V L GYNGT+ AYGQTG+ KT+TM GS+ E RGIIP S+
Sbjct: 63 NASQETVYEECARKLVTSTLDGYNGTVMAYGQTGSGKTFTMTGSTEKFEHRGIIPRSI 120
>SB_37851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 67.3 bits (157), Expect = 8e-12
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +3
Query: 327 VFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIPN 506
VFD TS D+Y A P++ V++G+NGTIFAYGQT + KT+TM G + P GIIP
Sbjct: 29 VFDQITSTEDVYGSFAKPVILSVMEGFNGTIFAYGQTASGKTHTMMGDDSCP---GIIPQ 85
Query: 507 SL 512
++
Sbjct: 86 AI 87
>SB_11212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1175
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
+++D VF + Q ++ + S +V+ L GYN IFAYGQTG+ KTYTM G E R
Sbjct: 275 FSFDKVFQHTSKQAQVF-EEISQLVQSALDGYNVCIFAYGQTGSGKTYTMEGDHNNLEHR 333
Query: 492 GIIPNSL 512
G+IP S+
Sbjct: 334 GMIPRSM 340
>SB_7436| Best HMM Match : Kinesin (HMM E-Value=0.00023)
Length = 116
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Frame = +3
Query: 282 NVTPPEPP------RVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGT 443
+VTP EP + + YD VF ++SQ ++Y +P+++ KGYN T+ AYGQTG+
Sbjct: 35 SVTPGEPQVIMGTNKAFTYDYVFGKSSSQKELYTDVVTPLLDGFFKGYNATVLAYGQTGS 94
Query: 444 RKTYTMAGSST 476
KT++M S T
Sbjct: 95 GKTHSMGTSFT 105
>SB_54210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +3
Query: 318 YDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSST 476
++ +F SQ +++ + AS +V ++ +GYNGTIFAYGQTGT KT+T+ G T
Sbjct: 54 FNGIFGPYCSQSEVFGEVASTLVYKLFEGYNGTIFAYGQTGTGKTFTVEGDET 106
>SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1368
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAP 482
+ +D VF+ + D++ T I++ VL G+N T+FAYG TG KT+TM GS+ P
Sbjct: 446 FIFDRVFNEEANNTDVFENTTKDIIDGVLDGFNCTVFAYGATGAGKTHTMLGSNNNP 502
>SB_36042| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 292
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGS---STAP 482
+ +D VFD Q +IY + +VE L GYN T+ AYGQTG KTYTM + P
Sbjct: 50 FTFDYVFDIPAKQPEIYEKCVKELVEGCLDGYNATVLAYGQTGAGKTYTMGTGFDVNIDP 109
Query: 483 ELRGIIPNSL 512
GI+P ++
Sbjct: 110 LEEGIVPRAV 119
>SB_21941| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 791
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 357 IYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIP 503
+Y + PIV+ VL+GYNGT+FAYGQT KT+TM GS+ GI P
Sbjct: 341 LYSEIVHPIVDGVLEGYNGTVFAYGQTSCGKTFTMQGSAQPESQVGITP 389
>SB_20166| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 378
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +3
Query: 285 VTPPEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTM 461
V P Y +D VF S ++Y++ P+V L GY GT+ YGQTGT KTYT+
Sbjct: 43 VLDPRRETNYFFDGVFGPEASNHELYLKVGRPLVYAALNGYKGTLLTYGQTGTGKTYTL 101
>SB_45045| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1260
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +3
Query: 306 RVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTM 461
R + +DAV + +Y P+V+ G+NGT+ AYGQTGT KTYTM
Sbjct: 56 RRFVFDAVLPPAATNRQVYSYAGRPLVDAAFSGFNGTLMAYGQTGTGKTYTM 107
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +3
Query: 252 RNGTVAVTRNNVTPPEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYG 431
+ G + + RN + E P+++ YDAV+D N+ Q+D+Y +T +VE VL+GYNG
Sbjct: 556 KKGQIEI-RNPLKKDEVPKMFTYDAVYDWNSKQIDLYDETFRQLVESVLEGYNGV----- 609
Query: 432 QTGTRKTYTMAGSSTAPELRGIIPNS 509
+ P+LRG+IPNS
Sbjct: 610 -------------RSDPDLRGVIPNS 622
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 414 TIFAYGQTGTRKTYTMAGSSTAPELRGIIPNS 509
TIFAYGQTGT KT+TM G + PELR I+PNS
Sbjct: 2 TIFAYGQTGTGKTFTMEGVRSVPELRDIVPNS 33
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 509 FAHIFSHIAKAKDDEKFLV 565
FAHIF HIAK +FLV
Sbjct: 34 FAHIFGHIAKVDGHVRFLV 52
>SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAP 482
+ D VF ++Q++++ + P+V + GYN IFAYGQTG+ KT+TM G + P
Sbjct: 363 FEMDRVFQPQSTQVEVF-EEVKPLVISCVDGYNVCIFAYGQTGSGKTFTMEGPVSNP 418
>SB_40388| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 500
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +3
Query: 345 SQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIP 503
+Q +Y ++E +GYN IFAYGQTG K+YTM G +GIIP
Sbjct: 21 NQQQVYSDIGKEMLEHAFEGYNVCIFAYGQTGAGKSYTMMGKLEQAGQKGIIP 73
>SB_42855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 294 PEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSS 473
P + + +D VF +++Q ++ T P++ + GYN I AYGQTG KT+TM G
Sbjct: 519 PSGRKTFMFDRVFTPDSTQEQVFEDTL-PLIASCVDGYNVCIMAYGQTGAGKTFTMMGPE 577
Query: 474 TAP 482
P
Sbjct: 578 DNP 580
>SB_29744| Best HMM Match : Kinesin (HMM E-Value=6.3e-30)
Length = 291
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 306 RVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTM 461
R++ +D V S ++Y P+VE L G G + AYGQTG KTYT+
Sbjct: 10 RIFEFDQVLAQEASNDEVYRVVGKPLVEACLTGMTGILMAYGQTGAGKTYTL 61
>SB_18382| Best HMM Match : Kinesin (HMM E-Value=2.3e-14)
Length = 278
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELR 491
+ +++V+ + D+Y P+VE + GYN ++ +G+TG+ K++++AG TA
Sbjct: 35 HIFNSVYSQKSLTYDVYKDCCEPLVELLCAGYNTSLLLFGETGSGKSFSLAGDKTAK--A 92
Query: 492 GIIP 503
G+IP
Sbjct: 93 GLIP 96
>SB_6601| Best HMM Match : Kinesin (HMM E-Value=1.5e-05)
Length = 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTA-SPIVEQVLKGYNGTIFAYGQTGTRKTYTMAG 467
+ ++ V NTSQ +++ + +V L+GY+ T FA+GQTG+ KT+T+ G
Sbjct: 78 FTFNVVLAENTSQAEMFEECGIKHLVNMALEGYSCTAFAFGQTGSGKTFTITG 130
>SB_39634| Best HMM Match : Kinesin (HMM E-Value=9.9e-39)
Length = 244
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 345 SQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAG 467
+Q ++ + +V+ +GYN IFAYGQTG+ KTYTM G
Sbjct: 74 NQERVFKDLGTDVVKAAFEGYNACIFAYGQTGSGKTYTMMG 114
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 309 VYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPEL 488
+++ D+ Q +Y P++ KGYN +FAYGQTG+ K+Y++ G EL
Sbjct: 337 LWSADSTNPDYIGQEKLYSLMGKPLLNSAFKGYNTCLFAYGQTGSGKSYSIMGQ--GDEL 394
Query: 489 RGIIP 503
GI+P
Sbjct: 395 -GILP 398
>SB_40762| Best HMM Match : Kinesin (HMM E-Value=8.5e-15)
Length = 224
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTG 440
Y +D F+ ++Q +IY + SP+++ VL G N ++FAYG TG
Sbjct: 68 YQFDGFFNDQSTQEEIYRFSISPVMQYVLLGENTSVFAYGPTG 110
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 348 QMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIP 503
Q ++ ++E KGYN ++FAYGQTG+ K+Y+M G +GI+P
Sbjct: 79 QKKVFDDLGVGVLENAWKGYNCSLFAYGQTGSGKSYSMVGYGAN---KGIVP 127
>SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 348 QMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIP 503
Q +Y +++ +GYN T+FAYGQTG+ K++++ G +GI+P
Sbjct: 1062 QRRVYEDVGKTVLQNAWEGYNSTLFAYGQTGSGKSWSIVGYGAN---KGIVP 1110
>SB_28964| Best HMM Match : Kinesin (HMM E-Value=2.4e-05)
Length = 296
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 342 TSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRKTYTMAGSS----TAPELRGIIPNS 509
T+Q ++ +++ +GYN +FAYGQT KTYTM G++ P + ++PN+
Sbjct: 136 TNQDTVFDDLGMGVLQAAYEGYNTCMFAYGQTSAGKTYTMMGTNDEVGLIPRICKVLPNN 195
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 381 IVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIPNSL 512
+++ + GYN IFAYGQTG+ KT+TM G GI P ++
Sbjct: 534 LIQSAVDGYNVCIFAYGQTGSGKTFTMIGDRDG-NFPGIAPRAM 576
>SB_9532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 393 VLKGYNGTIFAYGQTGTRKTYTMAGSSTAPEL 488
+ +G T FAYG TG+ KT+TM G+ P L
Sbjct: 220 ICRGVKATCFAYGCTGSGKTHTMLGTEDIPGL 251
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 354 DIYVQTASPIVE-QVLKGYNGTIFAYGQ 434
D Y+ + + VL GYNGTIFAYGQ
Sbjct: 44 DGYINNKREVYKFSVLSGYNGTIFAYGQ 71
>SB_11127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYN 410
+ + V+D NT+Q ++ Q A P+V+ VL G N
Sbjct: 48 HTFKHVYDENTTQKHLFDQVALPLVDDVLHGKN 80
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 357 IYVQTASPIVEQVLKGYNGTIFAYGQ 434
+Y A P++ + L G+N T+F YGQ
Sbjct: 3 LYHDLAEPLLNKALDGFNATLFVYGQ 28
>SB_50557| Best HMM Match : Kinesin (HMM E-Value=9.6e-24)
Length = 547
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 381 IVEQVLKGYNGTIFAYGQTGTRKTYTMAGSSTAPELRGIIPNSL 512
++ +GYN F+YG + + KT M G++ P L I N L
Sbjct: 62 LLSSAFEGYNVCAFSYGASNSGKTCVMFGTNDNPGLIPWICNEL 105
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 363 RICPSDW---C*SRRQHRKHKREAALEASRCSWSQP 265
R+C + + C RR R H++ + ++CSW+ P
Sbjct: 216 RVCSAGFPTLCKQRRHERSHQKNRQFKCNKCSWAFP 251
>SB_43995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 423 AYGQTGTRKTYTMAGS 470
AYGQTG+ KT+TM GS
Sbjct: 2 AYGQTGSGKTHTMLGS 17
>SB_37664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -2
Query: 562 QEFLVVLGLRYVTEDVCKEFGMIPLSSGAVLLPAIV*VFRVPVCPYANIVPL 407
++F+ G +Y D C+ G+ + A+LL A F VPVCP+A V L
Sbjct: 94 KQFMQAQGFQYCQIDSCRVGGLNEII--AILLMAAK--FGVPVCPHAGGVGL 141
>SB_48684| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-05)
Length = 276
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = -1
Query: 419 YSAVVPFEDLL---DNRAGRLDVYVHLTGVRVEDSIVSINARRLWRRHVVPGHSHSPVTE 249
YS V F +L+ ++ +LDVYV+LTGV + + + ++R +V H +P+ E
Sbjct: 180 YSCVFAFSNLMGVPNDVYQKLDVYVNLTGVHILVLVTHVCLNIAYKRQLV--HL-APLNE 236
Query: 248 ST 243
S+
Sbjct: 237 SS 238
>SB_43088| Best HMM Match : SDF (HMM E-Value=4.1e-08)
Length = 236
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = -1
Query: 434 LPVREYSAVVPFEDLLDNRAGRLDVYVHLTGVRV-----EDSIVSINARRLWRRHVVPGH 270
LPV + + V+P E LLD ++V+ G + + +V+++A ++ + HV PG
Sbjct: 156 LPVEDLALVLPIEWLLDRFRTTVNVWGDAVGAGIVNHMSKADLVAMDALQMEQGHVSPGS 215
Query: 269 SHS 261
S
Sbjct: 216 PSS 218
>SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08)
Length = 774
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = -1
Query: 419 YSAVVPFEDLL---DNRAGRLDVYVHLTGVRVEDSIVSINARRLWRRHVVPGHSHSPVTE 249
YS V F +L+ ++ +LDVYV+LTGV + + + ++R +V H +P+ E
Sbjct: 329 YSCVFAFSNLMGVPNDVYQKLDVYVNLTGVHILVLVTHVCLNIAYKRQLV--HL-APLNE 385
Query: 248 ST 243
S+
Sbjct: 386 SS 387
>SB_17067| Best HMM Match : TP2 (HMM E-Value=4.1)
Length = 330
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 439 EHGRPIQWRAAARLQNSGGSYRTLCTHLQSHSEGQGRRE 555
+ GRP+ W +SG L + Q S+ + RRE
Sbjct: 220 DRGRPVYWGTTMHCDSSGSDRERLSSDSQPSSDFRNRRE 258
>SB_30525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 312 YAYDAVFDSNTSQMDIYVQTASPIVEQV 395
+ +D VFD + ++Y +TA P+V +
Sbjct: 292 FMFDEVFDERYTNREVYERTAKPMVNAI 319
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 356 HIRPNGQPDCRASPQRVQRHYIRVRADGNTEDLYNGGQQHGSRTQGDH 499
H+R N + D P+R+ Y+R + E H R Q H
Sbjct: 476 HVRVNNEVDVWVEPRRIHNSYLRGNNSRHNEVYERVTHYHDYRNQYSH 523
>SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 270 VTRNNVTPPEPPRVYAYDAVFDSNTSQMDIYVQTASPIVEQVLKGYNGTIFAYGQTGTRK 449
VTR N+ PP PR+ A + +TS D+ + ++V K G + QT
Sbjct: 392 VTRPNIPPPRSPRLTATQSHPRPSTS-WDVDDAELCAVADRVEKEQKGVVETSSQTDP-V 449
Query: 450 TYTMAG 467
T+T G
Sbjct: 450 TFTKPG 455
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 388 SKSSKGTTALYSRTGRREHGRPIQW 462
+K S +++Y RTG R RP+ W
Sbjct: 1541 AKDSAVVSSVYKRTGARPKSRPLPW 1565
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,884,818
Number of Sequences: 59808
Number of extensions: 413375
Number of successful extensions: 1547
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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