Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1672X
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.25 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.25 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   3.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   7.2  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   7.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   7.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 264 KMIKTKRETSCDVKSVHL-RKDDIGPQKGAPNQRENSKRKKKRLLQNYLMIYLEKQKQLH 440
           +M   K E+  D K   +  K+++G  K   NQ  N+  KKK  ++  L  ++   K++ 
Sbjct: 437 EMRSEKPESKKDKKGSQVDHKNNLGDSKN--NQDGNNGEKKKPHIKKPLNAFMLYMKEMR 494

Query: 441 VFTGCHCLLK 470
                 C LK
Sbjct: 495 AKVVAECTLK 504


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 264 KMIKTKRETSCDVKSVHL-RKDDIGPQKGAPNQRENSKRKKKRLLQNYLMIYLEKQKQLH 440
           +M   K E+  D K   +  K+++G  K   NQ  N+  KKK  ++  L  ++   K++ 
Sbjct: 329 EMRSEKPESKKDKKGSQVDHKNNLGDSKN--NQDGNNGEKKKPHIKKPLNAFMLYMKEMR 386

Query: 441 VFTGCHCLLK 470
                 C LK
Sbjct: 387 AKVVAECTLK 396


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 404 LDDLFRKTKTTPCIYWLPLSAETVIIFIH 490
           +  LF  T  T  + W     +T+ +FIH
Sbjct: 274 ISGLFEITTITAMVMWFGYVIDTMYLFIH 302


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 404 LDDLFRKTKTTPCIYWLPLSAETVIIFIH 490
           +  LF  T  T  + W     +T+ +FIH
Sbjct: 230 ISGLFEITTITAMVMWFGYVIDTMYLFIH 258


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = -2

Query: 221  LFHFCLSFQILLPKPILNCSWNCRRWSTLCFLT 123
            LF FC++ + ++   +    +NC ++  + ++T
Sbjct: 979  LFFFCMAAEFIIAALLHPQEFNCLKYGVIYYVT 1011


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = -2

Query: 221  LFHFCLSFQILLPKPILNCSWNCRRWSTLCFLT 123
            LF FC++ + ++   +    +NC ++  + ++T
Sbjct: 979  LFFFCMAAEFIIAALLHPQEFNCLKYGVIYYVT 1011


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 288 TSCDVKSVHLRKDDIGPQKGAPNQ-RENSKRKKKRLLQNYLMIYLEKQKQLHVFT 449
           T+C+ K  HL        K  P +  E  KRK   LLQ Y  I+  +    H +T
Sbjct: 242 TTCNKKQ-HLESPSALQAKVDPLKIPEAEKRKLIHLLQEYRCIFSLRPGLTHKYT 295



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 333 GPQKGAPNQRENSKRKKKR 389
           GPQ  + NQ+  +  K+KR
Sbjct: 27  GPQSDSRNQQLRTGEKRKR 45


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 KKKRLLQNYLMIYLEKQK 431
           K  RLL+NY+   LEK K
Sbjct: 38  KSDRLLKNYVNCLLEKGK 55


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 378 KKKRLLQNYLMIYLEKQK 431
           K  RL +NYL   LEK K
Sbjct: 34  KNDRLTKNYLDCILEKGK 51


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 384 KRLLQNYLMIYLEKQK 431
           KRL  NYL   L+K K
Sbjct: 37  KRLFDNYLQCLLKKGK 52


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/34 (23%), Positives = 22/34 (64%)
 Frame = +3

Query: 339 QKGAPNQRENSKRKKKRLLQNYLMIYLEKQKQLH 440
           +K    Q+E +++++   L+ Y +  LEK+++++
Sbjct: 52  EKLLTEQKELAEKEEAETLKRYKLNDLEKRREVY 85


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/34 (23%), Positives = 22/34 (64%)
 Frame = +3

Query: 339 QKGAPNQRENSKRKKKRLLQNYLMIYLEKQKQLH 440
           +K    Q+E +++++   L+ Y +  LEK+++++
Sbjct: 212 EKLLTEQKELAEKEEAETLKRYKLNDLEKRREVY 245


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/34 (23%), Positives = 22/34 (64%)
 Frame = +3

Query: 339 QKGAPNQRENSKRKKKRLLQNYLMIYLEKQKQLH 440
           +K    Q+E +++++   L+ Y +  LEK+++++
Sbjct: 212 EKLLTEQKELAEKEEAETLKRYKLNDLEKRREVY 245


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 302 HVATCLSLCLYHFC 261
           + A  + LC+Y+FC
Sbjct: 289 YCALIILLCIYYFC 302


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 384 KRLLQNYLMIYLEKQK 431
           KRL  NYL   L+K K
Sbjct: 37  KRLFDNYLQCLLKKGK 52


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 384 KRLLQNYLMIYLEK 425
           KRLL NY+   LEK
Sbjct: 50  KRLLLNYINCLLEK 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,539
Number of Sequences: 336
Number of extensions: 2344
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)