Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1672X
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF124728-1|AAD56726.1|  614|Homo sapiens acinusS' protein.             47   4e-05
AF124727-1|AAD56725.1|  583|Homo sapiens acinusS protein.              47   4e-05
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.              47   4e-05
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.     47   4e-05
AK097971-1|BAC05207.1|  344|Homo sapiens protein ( Homo sapiens ...    31   2.7  
D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.               31   3.6  
BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein.       31   3.6  
AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit S...    31   3.6  
AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant...    31   3.6  
AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant...    31   3.6  

>AF124728-1|AAD56726.1|  614|Homo sapiens acinusS' protein.
          Length = 614

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 401 LLDDLFRKTKTTPCIYWLPLSAETVI 478
           LLDDLFRKTK  PCIYWLPL+   ++
Sbjct: 483 LLDDLFRKTKAAPCIYWLPLTDSQIV 508



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  QAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 110
           +AV TR ALHGV WP SNPK L  D++  +  D
Sbjct: 334 EAVATRTALHGVKWPQSNPKFLCADYAEQDELD 366


>AF124727-1|AAD56725.1|  583|Homo sapiens acinusS protein.
          Length = 583

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 401 LLDDLFRKTKTTPCIYWLPLSAETVI 478
           LLDDLFRKTK  PCIYWLPL+   ++
Sbjct: 452 LLDDLFRKTKAAPCIYWLPLTDSQIV 477



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  QAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 110
           +AV TR ALHGV WP SNPK L  D++  +  D
Sbjct: 303 EAVATRTALHGVKWPQSNPKFLCADYAEQDELD 335


>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
          Length = 1341

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 401  LLDDLFRKTKTTPCIYWLPLSAETVI 478
            LLDDLFRKTK  PCIYWLPL+   ++
Sbjct: 1210 LLDDLFRKTKAAPCIYWLPLTDSQIV 1235



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +3

Query: 12   QAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 110
            +AV TR ALHGV WP SNPK L  D++  +  D
Sbjct: 1061 EAVATRTALHGVKWPQSNPKFLCADYAEQDELD 1093


>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
          Length = 1286

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 401  LLDDLFRKTKTTPCIYWLPLSAETVI 478
            LLDDLFRKTK  PCIYWLPL+   ++
Sbjct: 1155 LLDDLFRKTKAAPCIYWLPLTDSQIV 1180



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +3

Query: 12   QAVETRHALHGVTWPVSNPKTLHVDFSTTEAFD 110
            +AV TR ALHGV WP SNPK L  D++  +  D
Sbjct: 1006 EAVATRTALHGVKWPQSNPKFLCADYAEQDELD 1038


>AK097971-1|BAC05207.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40652 fis, clone THYMU2018639. ).
          Length = 344

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 216 PLLPLFSDLAPEANPQLFLELPKVEHSLLPH-WIMLCQMLLLLKSPHVKSLDLI 58
           PLL  FS       PQL L LPKVE   +P  W +LC   +   SP   SL  I
Sbjct: 67  PLLQAFST----TGPQLSLLLPKVESPKVPSVWPILCPPPVASSSPPPLSLSAI 116


>D86970-1|BAA13206.2| 2067|Homo sapiens KIAA0216 protein.
          Length = 2067

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 249  EWM*AKMIKTKRETSCDVKSVHLRKDDIGPQKGAPNQRENSKRKKKRLLQNYL 407
            E+  A  +K ++    +++ +HL+ DDI   K A  ++ +  +++K  +QN L
Sbjct: 1709 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRL 1761


>BC039612-1|AAH39612.1| 2002|Homo sapiens MYO18A protein protein.
          Length = 2002

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 249  EWM*AKMIKTKRETSCDVKSVHLRKDDIGPQKGAPNQRENSKRKKKRLLQNYL 407
            E+  A  +K ++    +++ +HL+ DDI   K A  ++ +  +++K  +QN L
Sbjct: 1659 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRL 1711


>AY703984-1|AAV80770.1| 1581|Homo sapiens SP-A receptor subunit
            SP-R210 alphaS protein.
          Length = 1581

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 249  EWM*AKMIKTKRETSCDVKSVHLRKDDIGPQKGAPNQRENSKRKKKRLLQNYL 407
            E+  A  +K ++    +++ +HL+ DDI   K A  ++ +  +++K  +QN L
Sbjct: 1238 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRL 1290


>AB177860-1|BAD66838.1| 1715|Homo sapiens KIAA0216 splice variant 2
            protein.
          Length = 1715

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 249  EWM*AKMIKTKRETSCDVKSVHLRKDDIGPQKGAPNQRENSKRKKKRLLQNYL 407
            E+  A  +K ++    +++ +HL+ DDI   K A  ++ +  +++K  +QN L
Sbjct: 1372 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRL 1424


>AB177858-1|BAD66836.1| 2046|Homo sapiens KIAA0216 splice variant 1
            protein.
          Length = 2046

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 14/53 (26%), Positives = 30/53 (56%)
 Frame = +3

Query: 249  EWM*AKMIKTKRETSCDVKSVHLRKDDIGPQKGAPNQRENSKRKKKRLLQNYL 407
            E+  A  +K ++    +++ +HL+ DDI   K A  ++ +  +++K  +QN L
Sbjct: 1688 EFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRL 1740


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,416,894
Number of Sequences: 237096
Number of extensions: 1331138
Number of successful extensions: 7234
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7229
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)