Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1672X
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 85  TFQQQKHLTKHYPVRKQRVLHLRQFQEQLRI 177
           T + Q   T H  + K R  HLR   E+L++
Sbjct: 43  TKKSQGSRTTHNELEKNRRAHLRNCLEKLKV 73


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 321 KDDIGPQKGAPNQRENSKRKKKRLLQNYLM 410
           KD++ P K  P+ +E S ++ + +  N L+
Sbjct: 191 KDNLIPDKNDPDSKECSNQEYEIMKDNLLL 220


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -1

Query: 141 HSLLPHWIMLCQMLLLLKSPHVKSLDLIQAMSPH 40
           H+ L  +++LC ++  +    +  L+    +SP+
Sbjct: 445 HATLEKFMILCNLMRTMNRKQISELESNMQISPN 478


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 LEKQKQLHVFTGC 455
           LEK KQ+  F GC
Sbjct: 249 LEKAKQVGAFMGC 261


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 LEKQKQLHVFTGC 455
           LEK KQ+  F GC
Sbjct: 120 LEKAKQVGAFMGC 132


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 417 LEKQKQLHVFTGC 455
           LEK KQ+  F GC
Sbjct: 249 LEKAKQVGAFMGC 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,423
Number of Sequences: 438
Number of extensions: 2716
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)