Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1669X
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   10.0 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   10.0 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   10.0 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   10.0 

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 281 GQGAFGNMCRGGRMFAP 331
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 513 FGLLISWTLSATTKGSPGIFSIMCP 439
           FGL +  T +  T  +P  +   CP
Sbjct: 263 FGLPVGVTAAIPTSENPADYRYFCP 287


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 513 FGLLISWTLSATTKGSPGIFSIMCP 439
           FGL +  T +  T  +P  +   CP
Sbjct: 263 FGLPVGVTAAIPTSENPADYRYFCP 287


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 105 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 212
           K P++   + D+ + M    RQP+ +   A  + +A
Sbjct: 59  KLPVKAITLPDLSIPMQLGRRQPFSLFIPAHRKIAA 94


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 513 FGLLISWTLSATTKGSPGIFSIMCP 439
           FGL +  T +  T  +P  +   CP
Sbjct: 263 FGLPVGVTAAIPTSENPADYRYFCP 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,391
Number of Sequences: 438
Number of extensions: 2876
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)