Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1668
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.4
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 2.4
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 2.4
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.2
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 5.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.5
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 22 5.5
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 7.3
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 21 7.3
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 469 IEKIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 588
+ KIP E P + + S P SS G++ ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 252
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 475 KIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 588
KIP E P + + S P SS G++ ++SL C
Sbjct: 2 KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 475 KIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 588
KIP E P + + S P SS G++ ++SL C
Sbjct: 2 KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 469 IEKIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 588
+ KIP E P + + S P SS G++ ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPDPASRSSCLGSNTSSMLSLNC 252
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 197 CVSKEAGHQTSAESW 241
C K+ GH+ S SW
Sbjct: 1152 CEEKKPGHKPSTSSW 1166
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 470 LKRFPSFPWL*PTSPGDQQDQTGCHLPE 553
L+ +PS P++ S + Q +TG +P+
Sbjct: 356 LRLYPSVPFISRVSGSEIQTKTGYTIPK 383
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 5.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 130 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYR 249
A TSG G+ FY+ E + + G S N I +R
Sbjct: 1376 AQTSGGGENKPIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 5.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 130 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQCRIMGYR 249
A TSG G+ FY+ E + + G S N I +R
Sbjct: 1376 AQTSGGGENKPIFYLDEAFQRRVTQIGSTSSNNPSISAFR 1415
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 470 LKRFPSFPWL*PTSPGDQQDQTGCHLPE 553
L+ +PS P++ S + Q +TG +P+
Sbjct: 356 LRLYPSVPFISRVSGSEIQTKTGYTIPK 383
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 112 PVRIQGAHTSGPGQ*CSRFYVQELEAAL 195
PVRI G H G C++ E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 97 VSQAPPVRIQGAHTSGP 147
+S PP+ I GA +GP
Sbjct: 304 ISGVPPLSIDGALEAGP 320
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,303
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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