Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1668
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 113 6e-25
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 113 6e-25
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 112 1e-24
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 112 1e-24
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 37 0.060
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 31 3.0
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 31 3.0
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 31 3.0
AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein. 31 5.2
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 82 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 141
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 142 LAASALPALVMSKGHRIEEVPELPLVVEDK 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 171 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 230
Query: 687 LTR 695
+ +
Sbjct: 231 IIK 233
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 22 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 81
Query: 242 GTGRVL 259
GTGR +
Sbjct: 82 GTGRAV 87
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (272), Expect = 6e-25
Identities = 53/90 (58%), Positives = 57/90 (63%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 112 bits (270), Expect = 1e-24
Identities = 53/90 (58%), Positives = 56/90 (62%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
+GH IE++PELPLVV DK
Sbjct: 128 LAASALPALVMPKGHRIEEVPELPLVVEDK 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Query: 687 LTR 695
+ +
Sbjct: 217 IIK 219
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAGHQTSAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 112 bits (269), Expect = 1e-24
Identities = 53/90 (58%), Positives = 56/90 (62%)
Frame = +1
Query: 241 GYRTCVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 420
G VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
Query: 421 XXXXXXXXXXQARGHIIEKIPELPLVVADK 510
++GH IE+ PELPLVV DK
Sbjct: 128 LAASALPALVMSKGHRIEEFPELPLVVEDK 157
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +2
Query: 62 VGVFREE*DGAGSAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESW 241
+ V+ E+ + +G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESW
Sbjct: 8 ISVYSEKGESSGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAGHQTRAESW 67
Query: 242 GTGRVL 259
GTGR +
Sbjct: 68 GTGRAV 73
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/63 (63%), Positives = 53/63 (84%)
Frame = +3
Query: 507 QVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 686
+V+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN RRIQR+GP II+N+D G
Sbjct: 157 KVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRRGPCIIYNEDNG 215
Query: 687 LTR 695
+ +
Sbjct: 216 IIK 218
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 39 LSVARPLVSVYSEKSET 89
++VARPL+SVYSEK E+
Sbjct: 1 MAVARPLISVYSEKGES 17
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.060
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 456 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 355
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 331 HDTCYRRHPDRTYGYHHHGHAEFGQHTSG 245
HDT +R+HP +G+H HGH G H G
Sbjct: 374 HDT-HRQHP---HGHHPHGHHPHGHHPHG 398
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 331 HDTCYRRHPDRTYGYHHHGHAEFGQHTSG 245
HDT +R+HP +G+H HGH G H G
Sbjct: 374 HDT-HRQHP---HGHHPHGHHPHGHHPHG 398
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 331 HDTCYRRHPDRTYGYHHHGHAEFGQHTSG 245
HDT +R+HP +G+H HGH G H G
Sbjct: 374 HDT-HRQHP---HGHHPHGHHPHGHHPHG 398
>AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein.
Length = 287
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 354 EALAALAPSRQPPTAESGLGSSRCCYWRPSAR 449
E L A R PPT S ++ CC WR + R
Sbjct: 191 ENLLADVKGRGPPTTRSRAATANCCAWRAAIR 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,858,473
Number of Sequences: 237096
Number of extensions: 2298704
Number of successful extensions: 10011
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9978
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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