Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1665
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   5.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 464 FRCGRWDTEVTNIS-FIFRHPYNSSWKLIVVCPTFGKGDKIFKSC 595
           F  G    EV+ +S F F H  +  W +I +   + +G+    SC
Sbjct: 271 FIAGYMTEEVSGLSAFKFMHREDVRWVMIALRQMYDRGESKGSSC 315


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +3

Query: 483 ILKLLIYHLFFDILII 530
           +L + +Y+L+FD+++I
Sbjct: 214 LLMIQLYYLYFDVIVI 229


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +3

Query: 483 ILKLLIYHLFFDILII 530
           +L + +Y+L+FD+++I
Sbjct: 140 LLMIQLYYLYFDVIVI 155


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 604 HELTGFENLVTFSKGWAHYDKFPG 533
           HE TGF  ++ F  G +  + F G
Sbjct: 252 HEYTGFGTVIEFQYGLSLGNAFQG 275


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 604 HELTGFENLVTFSKGWAHYDKFPG 533
           HE TGF  ++ F  G +  + F G
Sbjct: 253 HEYTGFGTVIEFQYGLSLGNAFQG 276


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 604 HELTGFENLVTFSKGWAHYDKFPG 533
           HE TGF  ++ F  G +  + F G
Sbjct: 253 HEYTGFGTVIEFQYGLSLGNAFQG 276


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 281 AQFLYFILKYNVFEMMVNFFRLLHKI 358
           +QFLY  + Y + + + + +R +H++
Sbjct: 138 SQFLYGFMIYLILDTIKSKYRQMHRL 163


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 281 AQFLYFILKYNVFEMMVNFFR 343
           AQF+ + L Y V EM++  ++
Sbjct: 153 AQFIVYFLIYAVLEMLLQKYK 173


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 58  VHLVSNITLVSDLRILHFYQIFP*ITIYLNIALISLF 168
           +HL+    L+  L I +FY  F   T++L + L+ ++
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVHL-LLLVCIY 259


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 473  GRWDTEVTNISFIFRHP 523
            G+WD +  +++ ++ HP
Sbjct: 1594 GQWDKQTGHVAPLYYHP 1610


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 141 FKYRTYFPFPFTLFVNLYD 197
           F++ T F    T+F N YD
Sbjct: 451 FEFNTVFNDQRTVFANFYD 469


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 405 QSMNNHH 425
           QSMNNHH
Sbjct: 160 QSMNNHH 166


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 405 QSMNNHH 425
           QSMNNHH
Sbjct: 162 QSMNNHH 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,794
Number of Sequences: 336
Number of extensions: 3501
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)