Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1665
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040355-1|AAH40355.1|  275|Homo sapiens TMEM45A protein protein.      31   2.6  
AY450392-1|AAR21085.1|  275|Homo sapiens DNA polymerase-transact...    31   2.6  
AK000996-1|BAA91458.1|  275|Homo sapiens protein ( Homo sapiens ...    31   2.6  
AB013911-1|BAB87801.1|  275|Homo sapiens dermal papilla derived ...    31   2.6  

>BC040355-1|AAH40355.1|  275|Homo sapiens TMEM45A protein protein.
          Length = 275

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 393 IGSWWNIKTKKVILCSKRKKLTII-SKTLYFRIK 295
           IG WW  K+    +C K+K+   + SKTL++R++
Sbjct: 17  IGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLE 50


>AY450392-1|AAR21085.1|  275|Homo sapiens DNA
           polymerase-transactivated protein 4 protein.
          Length = 275

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 393 IGSWWNIKTKKVILCSKRKKLTII-SKTLYFRIK 295
           IG WW  K+    +C K+K+   + SKTL++R++
Sbjct: 17  IGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLE 50


>AK000996-1|BAA91458.1|  275|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10134 fis, clone HEMBA1003096. ).
          Length = 275

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 393 IGSWWNIKTKKVILCSKRKKLTII-SKTLYFRIK 295
           IG WW  K+    +C K+K+   + SKTL++R++
Sbjct: 17  IGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLE 50


>AB013911-1|BAB87801.1|  275|Homo sapiens dermal papilla derived
           protein 7 (DERP7) protein.
          Length = 275

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 393 IGSWWNIKTKKVILCSKRKKLTII-SKTLYFRIK 295
           IG WW  K+    +C K+K+   + SKTL++R++
Sbjct: 17  IGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLE 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,931,013
Number of Sequences: 237096
Number of extensions: 1743138
Number of successful extensions: 10500
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10500
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)